Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD74P04233 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD74P04233 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.27■□□□□ 0.68
CD74P04233 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD74P04233 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD74P04233 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.27■□□□□ 0.68
CD74P04233 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.27■□□□□ 0.68
CD74P04233 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD74P04233 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.27■□□□□ 0.68
CD74P04233 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CD74P04233 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CD74P04233 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CD74P04233 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CD74P04233 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CD74P04233 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD74P04233 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD74P04233 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD74P04233 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD74P04233 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD74P04233 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD74P04233 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD74P04233 AL161729.1-201ENST00000604104 1402 ntBASIC19.25■□□□□ 0.67
CD74P04233 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.25■□□□□ 0.67
CD74P04233 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD74P04233 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.25■□□□□ 0.67
CD74P04233 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CD74P04233 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD74P04233 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD74P04233 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.25■□□□□ 0.67
CD74P04233 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CD74P04233 AL024507.2-201ENST00000606070 2574 ntBASIC19.25■□□□□ 0.67
CD74P04233 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD74P04233 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD74P04233 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD74P04233 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD74P04233 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.24■□□□□ 0.67
CD74P04233 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD74P04233 KRT18P10-201ENST00000388836 1287 ntBASIC19.24■□□□□ 0.67
CD74P04233 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.24■□□□□ 0.67
CD74P04233 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.24■□□□□ 0.67
CD74P04233 CR559946.2-201ENST00000623684 991 ntBASIC19.24■□□□□ 0.67
CD74P04233 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD74P04233 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD74P04233 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD74P04233 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD74P04233 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD74P04233 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD74P04233 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.23■□□□□ 0.67
CD74P04233 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.23■□□□□ 0.67
CD74P04233 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD74P04233 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD74P04233 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD74P04233 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD74P04233 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CD74P04233 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CD74P04233 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD74P04233 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD74P04233 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD74P04233 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CD74P04233 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.22■□□□□ 0.67
CD74P04233 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.22■□□□□ 0.67
CD74P04233 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.22■□□□□ 0.67
CD74P04233 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CD74P04233 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.22■□□□□ 0.67
CD74P04233 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD74P04233 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD74P04233 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD74P04233 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CD74P04233 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD74P04233 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD74P04233 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD74P04233 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD74P04233 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.21■□□□□ 0.67
CD74P04233 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.21■□□□□ 0.67
CD74P04233 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.21■□□□□ 0.67
CD74P04233 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CD74P04233 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD74P04233 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CD74P04233 AC060814.1-201ENST00000554326 538 ntBASIC19.2■□□□□ 0.66
CD74P04233 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CD74P04233 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CD74P04233 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CD74P04233 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.2■□□□□ 0.66
CD74P04233 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.2■□□□□ 0.66
CD74P04233 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD74P04233 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD74P04233 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD74P04233 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD74P04233 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD74P04233 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD74P04233 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD74P04233 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD74P04233 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CD74P04233 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD74P04233 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CD74P04233 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD74P04233 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.19■□□□□ 0.66
CD74P04233 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD74P04233 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD74P04233 AC242852.2-201ENST00000615738 1807 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms