Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQB1P01920 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQB1P01920 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQB1P01920 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
HLA-DQB1P01920 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
HLA-DQB1P01920 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
HLA-DQB1P01920 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DQB1P01920 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.83■□□□□ 0.77
HLA-DQB1P01920 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
HLA-DQB1P01920 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
HLA-DQB1P01920 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DQB1P01920 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
HLA-DQB1P01920 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DQB1P01920 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQB1P01920 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.82■□□□□ 0.76
HLA-DQB1P01920 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQB1P01920 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.82■□□□□ 0.76
HLA-DQB1P01920 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.82■□□□□ 0.76
HLA-DQB1P01920 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HLA-DQB1P01920 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.82■□□□□ 0.76
HLA-DQB1P01920 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQB1P01920 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQB1P01920 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB1P01920 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.81■□□□□ 0.76
HLA-DQB1P01920 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DQB1P01920 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DQB1P01920 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB1P01920 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.81■□□□□ 0.76
HLA-DQB1P01920 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB1P01920 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB1P01920 AC126177.7-201ENST00000547904 679 ntBASIC19.81■□□□□ 0.76
HLA-DQB1P01920 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.81■□□□□ 0.76
HLA-DQB1P01920 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HLA-DQB1P01920 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB1P01920 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB1P01920 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
HLA-DQB1P01920 AC242852.2-201ENST00000615738 1807 ntBASIC19.81■□□□□ 0.76
HLA-DQB1P01920 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB1P01920 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DQB1P01920 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.8■□□□□ 0.76
HLA-DQB1P01920 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DQB1P01920 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DQB1P01920 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DQB1P01920 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DQB1P01920 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DQB1P01920 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DQB1P01920 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DQB1P01920 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DQB1P01920 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HLA-DQB1P01920 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DQB1P01920 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.79■□□□□ 0.76
HLA-DQB1P01920 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DQB1P01920 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DQB1P01920 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.78■□□□□ 0.76
HLA-DQB1P01920 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DQB1P01920 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DQB1P01920 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DQB1P01920 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DQB1P01920 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DQB1P01920 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DQB1P01920 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.78■□□□□ 0.76
HLA-DQB1P01920 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DQB1P01920 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DQB1P01920 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DQB1P01920 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HLA-DQB1P01920 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DQB1P01920 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DQB1P01920 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DQB1P01920 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DQB1P01920 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DQB1P01920 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DQB1P01920 CR559946.2-201ENST00000623684 991 ntBASIC19.77■□□□□ 0.76
HLA-DQB1P01920 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DQB1P01920 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.77■□□□□ 0.75
HLA-DQB1P01920 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
HLA-DQB1P01920 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
HLA-DQB1P01920 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
HLA-DQB1P01920 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HLA-DQB1P01920 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DQB1P01920 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DQB1P01920 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DQB1P01920 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DQB1P01920 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DQB1P01920 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DQB1P01920 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.76■□□□□ 0.75
HLA-DQB1P01920 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DQB1P01920 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DQB1P01920 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DQB1P01920 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.75■□□□□ 0.75
HLA-DQB1P01920 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HLA-DQB1P01920 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.75■□□□□ 0.75
HLA-DQB1P01920 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DQB1P01920 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.75■□□□□ 0.75
HLA-DQB1P01920 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.75■□□□□ 0.75
HLA-DQB1P01920 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DQB1P01920 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DQB1P01920 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DQB1P01920 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.75■□□□□ 0.75
HLA-DQB1P01920 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DQB1P01920 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 191.1 ms