Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.24■□□□□ 0.35
LTAP01374 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.24■□□□□ 0.35
LTAP01374 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LTAP01374 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
LTAP01374 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.24■□□□□ 0.35
LTAP01374 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LTAP01374 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LTAP01374 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LTAP01374 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.24■□□□□ 0.35
LTAP01374 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LTAP01374 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.23■□□□□ 0.35
LTAP01374 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LTAP01374 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LTAP01374 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LTAP01374 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.23■□□□□ 0.35
LTAP01374 RP9P-202ENST00000450133 1212 ntBASIC17.23■□□□□ 0.35
LTAP01374 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LTAP01374 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.23■□□□□ 0.35
LTAP01374 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.23■□□□□ 0.35
LTAP01374 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LTAP01374 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LTAP01374 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.23■□□□□ 0.35
LTAP01374 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LTAP01374 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
LTAP01374 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LTAP01374 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LTAP01374 AL161729.1-201ENST00000604104 1402 ntBASIC17.22■□□□□ 0.35
LTAP01374 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
LTAP01374 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.22■□□□□ 0.35
LTAP01374 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LTAP01374 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LTAP01374 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.22■□□□□ 0.35
LTAP01374 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LTAP01374 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LTAP01374 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LTAP01374 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LTAP01374 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LTAP01374 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LTAP01374 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LTAP01374 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LTAP01374 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LTAP01374 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LTAP01374 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.21■□□□□ 0.35
LTAP01374 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LTAP01374 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.21■□□□□ 0.35
LTAP01374 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LTAP01374 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.21■□□□□ 0.35
LTAP01374 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LTAP01374 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LTAP01374 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LTAP01374 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.21■□□□□ 0.34
LTAP01374 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LTAP01374 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LTAP01374 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LTAP01374 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LTAP01374 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LTAP01374 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.2■□□□□ 0.34
LTAP01374 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LTAP01374 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
LTAP01374 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LTAP01374 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.2■□□□□ 0.34
LTAP01374 AC092296.2-201ENST00000589470 999 ntBASIC17.2■□□□□ 0.34
LTAP01374 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LTAP01374 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.2■□□□□ 0.34
LTAP01374 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
LTAP01374 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LTAP01374 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LTAP01374 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LTAP01374 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LTAP01374 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LTAP01374 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LTAP01374 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.19■□□□□ 0.34
LTAP01374 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LTAP01374 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LTAP01374 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LTAP01374 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LTAP01374 AC093536.1-201ENST00000569153 554 ntBASIC17.19■□□□□ 0.34
LTAP01374 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.19■□□□□ 0.34
LTAP01374 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LTAP01374 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LTAP01374 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LTAP01374 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LTAP01374 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LTAP01374 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LTAP01374 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LTAP01374 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LTAP01374 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LTAP01374 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LTAP01374 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.18■□□□□ 0.34
LTAP01374 MIR3648-2-201ENST00000581792 180 ntBASIC17.18■□□□□ 0.34
LTAP01374 MIR3648-1-201ENST00000615959 180 ntBASIC17.18■□□□□ 0.34
LTAP01374 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.18■□□□□ 0.34
LTAP01374 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.18■□□□□ 0.34
LTAP01374 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.18■□□□□ 0.34
LTAP01374 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LTAP01374 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LTAP01374 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LTAP01374 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
LTAP01374 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.18■□□□□ 0.34
LTAP01374 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms