Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LGI1O95970 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.15■□□□□ 0.98
LGI1O95970 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
LGI1O95970 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LGI1O95970 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.15■□□□□ 0.98
LGI1O95970 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.14■□□□□ 0.97
LGI1O95970 AC011551.1-201ENST00000614101 683 ntBASIC21.14■□□□□ 0.97
LGI1O95970 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
LGI1O95970 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.14■□□□□ 0.97
LGI1O95970 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
LGI1O95970 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LGI1O95970 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LGI1O95970 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LGI1O95970 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LGI1O95970 AL033527.3-201ENST00000566366 1196 ntBASIC21.13■□□□□ 0.97
LGI1O95970 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LGI1O95970 AL022069.1-201ENST00000568025 1636 ntBASIC21.13■□□□□ 0.97
LGI1O95970 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LGI1O95970 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LGI1O95970 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
LGI1O95970 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LGI1O95970 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
LGI1O95970 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LGI1O95970 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LGI1O95970 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LGI1O95970 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.12■□□□□ 0.97
LGI1O95970 TSPY13P-201ENST00000338964 914 ntBASIC21.12■□□□□ 0.97
LGI1O95970 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.12■□□□□ 0.97
LGI1O95970 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.12■□□□□ 0.97
LGI1O95970 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
LGI1O95970 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LGI1O95970 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.11■□□□□ 0.97
LGI1O95970 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LGI1O95970 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.11■□□□□ 0.97
LGI1O95970 AC022616.5-201ENST00000518796 181 ntBASIC21.11■□□□□ 0.97
LGI1O95970 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LGI1O95970 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
LGI1O95970 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LGI1O95970 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LGI1O95970 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LGI1O95970 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.11■□□□□ 0.97
LGI1O95970 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LGI1O95970 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.1■□□□□ 0.97
LGI1O95970 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LGI1O95970 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LGI1O95970 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LGI1O95970 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LGI1O95970 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.1■□□□□ 0.97
LGI1O95970 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LGI1O95970 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LGI1O95970 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.09■□□□□ 0.97
LGI1O95970 ANOS2P-203ENST00000472227 1816 ntBASIC21.09■□□□□ 0.97
LGI1O95970 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LGI1O95970 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LGI1O95970 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LGI1O95970 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LGI1O95970 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.09■□□□□ 0.97
LGI1O95970 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LGI1O95970 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LGI1O95970 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LGI1O95970 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.08■□□□□ 0.97
LGI1O95970 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LGI1O95970 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LGI1O95970 C9orf163-202ENST00000624034 2573 ntBASIC21.08■□□□□ 0.97
LGI1O95970 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LGI1O95970 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LGI1O95970 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.08■□□□□ 0.97
LGI1O95970 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LGI1O95970 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LGI1O95970 CLDN5-201ENST00000403084 2357 ntBASIC21.08■□□□□ 0.96
LGI1O95970 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
LGI1O95970 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.07■□□□□ 0.96
LGI1O95970 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
LGI1O95970 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
LGI1O95970 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LGI1O95970 AC139795.1-202ENST00000500444 432 ntBASIC21.07■□□□□ 0.96
LGI1O95970 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LGI1O95970 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.07■□□□□ 0.96
LGI1O95970 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LGI1O95970 AC131274.2-201ENST00000580697 1507 ntBASIC21.07■□□□□ 0.96
LGI1O95970 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
LGI1O95970 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.07■□□□□ 0.96
LGI1O95970 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
LGI1O95970 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LGI1O95970 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LGI1O95970 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.06■□□□□ 0.96
LGI1O95970 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LGI1O95970 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LGI1O95970 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
LGI1O95970 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LGI1O95970 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LGI1O95970 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LGI1O95970 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.06■□□□□ 0.96
LGI1O95970 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.06■□□□□ 0.96
LGI1O95970 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.06■□□□□ 0.96
LGI1O95970 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.06■□□□□ 0.96
LGI1O95970 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LGI1O95970 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LGI1O95970 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
LGI1O95970 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms