Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CPNE3O75131 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.87■■□□□ 1.09
CPNE3O75131 AC020928.2-201ENST00000588717 2197 ntBASIC21.87■■□□□ 1.09
CPNE3O75131 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CPNE3O75131 AC110285.6-201ENST00000617652 491 ntBASIC21.87■■□□□ 1.09
CPNE3O75131 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE3O75131 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE3O75131 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE3O75131 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.87■■□□□ 1.09
CPNE3O75131 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.87■■□□□ 1.09
CPNE3O75131 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CPNE3O75131 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPNE3O75131 AC005703.6-201ENST00000623265 1329 ntBASIC21.86■■□□□ 1.09
CPNE3O75131 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CPNE3O75131 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPNE3O75131 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CPNE3O75131 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPNE3O75131 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CPNE3O75131 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.86■■□□□ 1.09
CPNE3O75131 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CPNE3O75131 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.86■■□□□ 1.09
CPNE3O75131 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE3O75131 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE3O75131 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE3O75131 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE3O75131 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE3O75131 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.84■■□□□ 1.09
CPNE3O75131 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE3O75131 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE3O75131 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CPNE3O75131 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.84■■□□□ 1.09
CPNE3O75131 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CPNE3O75131 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.83■■□□□ 1.09
CPNE3O75131 AC131274.2-201ENST00000580697 1507 ntBASIC21.83■■□□□ 1.09
CPNE3O75131 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPNE3O75131 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CPNE3O75131 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
CPNE3O75131 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
CPNE3O75131 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.82■■□□□ 1.08
CPNE3O75131 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE3O75131 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE3O75131 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE3O75131 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE3O75131 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.82■■□□□ 1.08
CPNE3O75131 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.82■■□□□ 1.08
CPNE3O75131 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.82■■□□□ 1.08
CPNE3O75131 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE3O75131 SRD5A1P1-201ENST00000442297 786 ntBASIC21.82■■□□□ 1.08
CPNE3O75131 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE3O75131 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE3O75131 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE3O75131 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE3O75131 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE3O75131 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE3O75131 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE3O75131 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CPNE3O75131 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE3O75131 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE3O75131 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.81■■□□□ 1.08
CPNE3O75131 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.81■■□□□ 1.08
CPNE3O75131 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.81■■□□□ 1.08
CPNE3O75131 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.81■■□□□ 1.08
CPNE3O75131 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.81■■□□□ 1.08
CPNE3O75131 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.81■■□□□ 1.08
CPNE3O75131 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE3O75131 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE3O75131 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE3O75131 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE3O75131 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE3O75131 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE3O75131 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.8■■□□□ 1.08
CPNE3O75131 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE3O75131 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.8■■□□□ 1.08
CPNE3O75131 AL022069.1-201ENST00000568025 1636 ntBASIC21.8■■□□□ 1.08
CPNE3O75131 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE3O75131 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE3O75131 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE3O75131 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE3O75131 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE3O75131 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE3O75131 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE3O75131 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE3O75131 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE3O75131 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE3O75131 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE3O75131 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE3O75131 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE3O75131 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE3O75131 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE3O75131 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE3O75131 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE3O75131 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.78■■□□□ 1.08
CPNE3O75131 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.78■■□□□ 1.08
CPNE3O75131 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.78■■□□□ 1.08
CPNE3O75131 AC133561.4-201ENST00000566112 224 ntBASIC21.78■■□□□ 1.08
CPNE3O75131 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE3O75131 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE3O75131 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CPNE3O75131 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE3O75131 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms