Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HCN1O60741 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.28■■□□□ 1
HCN1O60741 AC131212.1-201ENST00000613771 668 ntBASIC21.28■■□□□ 1
HCN1O60741 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HCN1O60741 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.27■■□□□ 1
HCN1O60741 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.27■■□□□ 1
HCN1O60741 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.27■■□□□ 1
HCN1O60741 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HCN1O60741 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
HCN1O60741 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HCN1O60741 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HCN1O60741 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.26■□□□□ 0.99
HCN1O60741 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HCN1O60741 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.26■□□□□ 0.99
HCN1O60741 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.26■□□□□ 0.99
HCN1O60741 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.26■□□□□ 0.99
HCN1O60741 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.26■□□□□ 0.99
HCN1O60741 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.26■□□□□ 0.99
HCN1O60741 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HCN1O60741 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.26■□□□□ 0.99
HCN1O60741 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HCN1O60741 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HCN1O60741 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HCN1O60741 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
HCN1O60741 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HCN1O60741 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HCN1O60741 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HCN1O60741 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HCN1O60741 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
HCN1O60741 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HCN1O60741 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.25■□□□□ 0.99
HCN1O60741 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.25■□□□□ 0.99
HCN1O60741 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.25■□□□□ 0.99
HCN1O60741 AC079834.2-201ENST00000609776 1949 ntBASIC21.25■□□□□ 0.99
HCN1O60741 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.24■□□□□ 0.99
HCN1O60741 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HCN1O60741 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.24■□□□□ 0.99
HCN1O60741 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HCN1O60741 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HCN1O60741 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.24■□□□□ 0.99
HCN1O60741 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
HCN1O60741 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
HCN1O60741 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.24■□□□□ 0.99
HCN1O60741 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HCN1O60741 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.24■□□□□ 0.99
HCN1O60741 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.23■□□□□ 0.99
HCN1O60741 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HCN1O60741 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HCN1O60741 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.23■□□□□ 0.99
HCN1O60741 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.23■□□□□ 0.99
HCN1O60741 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
HCN1O60741 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
HCN1O60741 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HCN1O60741 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
HCN1O60741 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
HCN1O60741 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HCN1O60741 AC068473.5-201ENST00000616428 2072 ntBASIC21.22■□□□□ 0.99
HCN1O60741 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
HCN1O60741 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HCN1O60741 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.22■□□□□ 0.99
HCN1O60741 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
HCN1O60741 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HCN1O60741 AC092028.1-203ENST00000608262 953 ntBASIC21.22■□□□□ 0.99
HCN1O60741 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.22■□□□□ 0.99
HCN1O60741 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.22■□□□□ 0.99
HCN1O60741 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.22■□□□□ 0.99
HCN1O60741 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HCN1O60741 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
HCN1O60741 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HCN1O60741 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HCN1O60741 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HCN1O60741 UNC93B8-201ENST00000511903 705 ntBASIC21.21■□□□□ 0.99
HCN1O60741 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.21■□□□□ 0.99
HCN1O60741 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.21■□□□□ 0.99
HCN1O60741 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HCN1O60741 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HCN1O60741 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HCN1O60741 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
HCN1O60741 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HCN1O60741 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HCN1O60741 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HCN1O60741 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HCN1O60741 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.2■□□□□ 0.98
HCN1O60741 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.2■□□□□ 0.98
HCN1O60741 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HCN1O60741 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HCN1O60741 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HCN1O60741 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HCN1O60741 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HCN1O60741 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HCN1O60741 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HCN1O60741 KRT16P3-201ENST00000439127 1283 ntBASIC21.19■□□□□ 0.98
HCN1O60741 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.19■□□□□ 0.98
HCN1O60741 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HCN1O60741 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
HCN1O60741 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
HCN1O60741 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HCN1O60741 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HCN1O60741 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.18■□□□□ 0.98
HCN1O60741 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms