Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.05■■□□□ 1.76
CCNT1O60563 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.05■■□□□ 1.76
CCNT1O60563 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCNT1O60563 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.04■■□□□ 1.76
CCNT1O60563 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
CCNT1O60563 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.04■■□□□ 1.76
CCNT1O60563 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.04■■□□□ 1.76
CCNT1O60563 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.04■■□□□ 1.76
CCNT1O60563 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCNT1O60563 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
CCNT1O60563 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CCNT1O60563 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCNT1O60563 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCNT1O60563 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CCNT1O60563 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CCNT1O60563 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCNT1O60563 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.03■■□□□ 1.76
CCNT1O60563 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCNT1O60563 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CCNT1O60563 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCNT1O60563 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCNT1O60563 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CCNT1O60563 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.02■■□□□ 1.76
CCNT1O60563 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCNT1O60563 UNC93B8-201ENST00000511903 705 ntBASIC26.02■■□□□ 1.76
CCNT1O60563 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.02■■□□□ 1.76
CCNT1O60563 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CCNT1O60563 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCNT1O60563 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
CCNT1O60563 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
CCNT1O60563 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
CCNT1O60563 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
CCNT1O60563 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CCNT1O60563 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CCNT1O60563 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.01■■□□□ 1.75
CCNT1O60563 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.01■■□□□ 1.75
CCNT1O60563 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.01■■□□□ 1.75
CCNT1O60563 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CCNT1O60563 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26■■□□□ 1.75
CCNT1O60563 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
CCNT1O60563 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCNT1O60563 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26■■□□□ 1.75
CCNT1O60563 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
CCNT1O60563 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCNT1O60563 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCNT1O60563 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26■■□□□ 1.75
CCNT1O60563 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26■■□□□ 1.75
CCNT1O60563 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26■■□□□ 1.75
CCNT1O60563 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCNT1O60563 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.99■■□□□ 1.75
CCNT1O60563 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.99■■□□□ 1.75
CCNT1O60563 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCNT1O60563 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCNT1O60563 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCNT1O60563 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCNT1O60563 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.99■■□□□ 1.75
CCNT1O60563 MTDHP2-201ENST00000601468 714 ntBASIC25.99■■□□□ 1.75
CCNT1O60563 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.99■■□□□ 1.75
CCNT1O60563 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCNT1O60563 ALDH1A3-203ENST00000557963 1670 ntBASIC25.99■■□□□ 1.75
CCNT1O60563 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCNT1O60563 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.98■■□□□ 1.75
CCNT1O60563 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCNT1O60563 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.98■■□□□ 1.75
CCNT1O60563 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CCNT1O60563 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
CCNT1O60563 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.97■■□□□ 1.75
CCNT1O60563 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CCNT1O60563 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
CCNT1O60563 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCNT1O60563 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCNT1O60563 AC010997.5-201ENST00000609182 354 ntBASIC25.97■■□□□ 1.75
CCNT1O60563 MIR6722-201ENST00000617286 78 ntBASIC25.97■■□□□ 1.75
CCNT1O60563 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCNT1O60563 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.97■■□□□ 1.75
CCNT1O60563 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCNT1O60563 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
CCNT1O60563 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CCNT1O60563 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.96■■□□□ 1.75
CCNT1O60563 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.96■■□□□ 1.75
CCNT1O60563 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CCNT1O60563 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.96■■□□□ 1.75
CCNT1O60563 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.96■■□□□ 1.75
CCNT1O60563 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CCNT1O60563 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CCNT1O60563 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
CCNT1O60563 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CCNT1O60563 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.95■■□□□ 1.75
CCNT1O60563 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.95■■□□□ 1.75
CCNT1O60563 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.95■■□□□ 1.74
CCNT1O60563 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.95■■□□□ 1.74
CCNT1O60563 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
CCNT1O60563 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CCNT1O60563 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.95■■□□□ 1.74
CCNT1O60563 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.95■■□□□ 1.74
CCNT1O60563 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CCNT1O60563 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
CCNT1O60563 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CCNT1O60563 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CCNT1O60563 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms