Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHGA12O60330 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA12O60330 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGA12O60330 AC005703.6-201ENST00000623265 1329 ntBASIC22.67■■□□□ 1.22
PCDHGA12O60330 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGA12O60330 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.67■■□□□ 1.22
PCDHGA12O60330 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGA12O60330 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.67■■□□□ 1.22
PCDHGA12O60330 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGA12O60330 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGA12O60330 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA12O60330 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA12O60330 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
PCDHGA12O60330 ERN1-208ENST00000606895 2068 ntBASIC22.66■■□□□ 1.22
PCDHGA12O60330 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA12O60330 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA12O60330 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
PCDHGA12O60330 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA12O60330 AC105265.2-201ENST00000467189 838 ntBASIC22.66■■□□□ 1.22
PCDHGA12O60330 AC104564.3-201ENST00000582367 638 ntBASIC22.66■■□□□ 1.22
PCDHGA12O60330 AC092171.4-201ENST00000609130 632 ntBASIC22.66■■□□□ 1.22
PCDHGA12O60330 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA12O60330 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA12O60330 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.65■■□□□ 1.22
PCDHGA12O60330 AC096887.2-201ENST00000623443 1957 ntBASIC22.65■■□□□ 1.22
PCDHGA12O60330 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHGA12O60330 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA12O60330 MIR939-201ENST00000401314 82 ntBASIC22.65■■□□□ 1.22
PCDHGA12O60330 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.65■■□□□ 1.22
PCDHGA12O60330 AF213884.3-201ENST00000563833 479 ntBASIC22.65■■□□□ 1.22
PCDHGA12O60330 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.65■■□□□ 1.22
PCDHGA12O60330 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA12O60330 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA12O60330 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA12O60330 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.64■■□□□ 1.22
PCDHGA12O60330 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
PCDHGA12O60330 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHGA12O60330 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHGA12O60330 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
PCDHGA12O60330 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGA12O60330 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA12O60330 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA12O60330 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDHGA12O60330 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA12O60330 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
PCDHGA12O60330 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA12O60330 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA12O60330 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.63■■□□□ 1.21
PCDHGA12O60330 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA12O60330 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
PCDHGA12O60330 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGA12O60330 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
PCDHGA12O60330 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA12O60330 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA12O60330 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA12O60330 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA12O60330 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA12O60330 AP001330.3-201ENST00000520123 633 ntBASIC22.62■■□□□ 1.21
PCDHGA12O60330 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDHGA12O60330 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDHGA12O60330 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA12O60330 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
PCDHGA12O60330 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
PCDHGA12O60330 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA12O60330 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA12O60330 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGA12O60330 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.62■■□□□ 1.21
PCDHGA12O60330 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.61■■□□□ 1.21
PCDHGA12O60330 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGA12O60330 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGA12O60330 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.61■■□□□ 1.21
PCDHGA12O60330 AC091305.1-201ENST00000479476 895 ntBASIC22.61■■□□□ 1.21
PCDHGA12O60330 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
PCDHGA12O60330 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGA12O60330 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.6■■□□□ 1.21
PCDHGA12O60330 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGA12O60330 SYT6-210ENST00000641643 1587 ntBASIC22.6■■□□□ 1.21
PCDHGA12O60330 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDHGA12O60330 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGA12O60330 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGA12O60330 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
PCDHGA12O60330 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
PCDHGA12O60330 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGA12O60330 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA12O60330 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA12O60330 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA12O60330 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA12O60330 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA12O60330 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.59■■□□□ 1.21
PCDHGA12O60330 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDHGA12O60330 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHGA12O60330 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGA12O60330 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
PCDHGA12O60330 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGA12O60330 AC010501.1-201ENST00000606270 1962 ntBASIC22.58■■□□□ 1.21
PCDHGA12O60330 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGA12O60330 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDHGA12O60330 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.58■■□□□ 1.21
PCDHGA12O60330 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGA12O60330 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms