Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.67■■□□□ 1.06
URB1O60287 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.67■■□□□ 1.06
URB1O60287 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
URB1O60287 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
URB1O60287 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
URB1O60287 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.66■■□□□ 1.06
URB1O60287 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.66■■□□□ 1.06
URB1O60287 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.66■■□□□ 1.06
URB1O60287 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
URB1O60287 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
URB1O60287 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
URB1O60287 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
URB1O60287 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
URB1O60287 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
URB1O60287 AP004609.3-201ENST00000610705 1884 ntBASIC21.65■■□□□ 1.06
URB1O60287 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
URB1O60287 ABHD17AP1-201ENST00000358206 933 ntBASIC21.65■■□□□ 1.06
URB1O60287 HLA-L-209ENST00000420110 1011 ntBASIC21.65■■□□□ 1.06
URB1O60287 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.65■■□□□ 1.06
URB1O60287 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
URB1O60287 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
URB1O60287 AC009102.2-201ENST00000606772 1639 ntBASIC21.65■■□□□ 1.06
URB1O60287 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
URB1O60287 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
URB1O60287 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
URB1O60287 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
URB1O60287 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.64■■□□□ 1.05
URB1O60287 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
URB1O60287 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
URB1O60287 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.64■■□□□ 1.05
URB1O60287 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
URB1O60287 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
URB1O60287 AC136469.2-201ENST00000623944 1028 ntBASIC21.63■■□□□ 1.05
URB1O60287 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
URB1O60287 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
URB1O60287 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
URB1O60287 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.63■■□□□ 1.05
URB1O60287 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.63■■□□□ 1.05
URB1O60287 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.63■■□□□ 1.05
URB1O60287 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
URB1O60287 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
URB1O60287 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
URB1O60287 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
URB1O60287 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.62■■□□□ 1.05
URB1O60287 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.62■■□□□ 1.05
URB1O60287 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.62■■□□□ 1.05
URB1O60287 AL358852.1-201ENST00000623174 1268 ntBASIC21.62■■□□□ 1.05
URB1O60287 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.62■■□□□ 1.05
URB1O60287 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
URB1O60287 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
URB1O60287 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
URB1O60287 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
URB1O60287 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
URB1O60287 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
URB1O60287 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.61■■□□□ 1.05
URB1O60287 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
URB1O60287 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
URB1O60287 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
URB1O60287 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.61■■□□□ 1.05
URB1O60287 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
URB1O60287 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.61■■□□□ 1.05
URB1O60287 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
URB1O60287 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
URB1O60287 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.6■■□□□ 1.05
URB1O60287 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.6■■□□□ 1.05
URB1O60287 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
URB1O60287 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
URB1O60287 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
URB1O60287 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
URB1O60287 C17orf82-201ENST00000623772 1530 ntBASIC21.6■■□□□ 1.05
URB1O60287 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
URB1O60287 AC027612.3-201ENST00000413684 1047 ntBASIC21.6■■□□□ 1.05
URB1O60287 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
URB1O60287 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
URB1O60287 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
URB1O60287 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.59■■□□□ 1.05
URB1O60287 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.59■■□□□ 1.05
URB1O60287 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
URB1O60287 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
URB1O60287 AC066615.1-201ENST00000640911 628 ntBASIC21.59■■□□□ 1.05
URB1O60287 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
URB1O60287 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
URB1O60287 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
URB1O60287 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
URB1O60287 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
URB1O60287 AC241377.3-202ENST00000626088 1088 ntBASIC21.58■■□□□ 1.05
URB1O60287 AC241585.3-202ENST00000628937 1088 ntBASIC21.58■■□□□ 1.05
URB1O60287 AC245100.8-202ENST00000629247 1058 ntBASIC21.58■■□□□ 1.05
URB1O60287 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
URB1O60287 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.58■■□□□ 1.05
URB1O60287 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
URB1O60287 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
URB1O60287 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
URB1O60287 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
URB1O60287 AC006455.2-201ENST00000429931 906 ntBASIC21.58■■□□□ 1.04
URB1O60287 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
URB1O60287 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
URB1O60287 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.57■■□□□ 1.04
URB1O60287 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.57■■□□□ 1.04
URB1O60287 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms