Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AC069152.1-201ENST00000438030 544 ntBASIC25.62■■□□□ 1.69
TNRC18O15417 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
TNRC18O15417 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
TNRC18O15417 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC25.61■■□□□ 1.69
TNRC18O15417 AC098590.1-201ENST00000468126 897 ntBASIC25.61■■□□□ 1.69
TNRC18O15417 AL139393.2-201ENST00000608721 2025 ntBASIC25.61■■□□□ 1.69
TNRC18O15417 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.61■■□□□ 1.69
TNRC18O15417 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC25.61■■□□□ 1.69
TNRC18O15417 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
TNRC18O15417 PRORSD1P-201ENST00000295112 541 ntBASIC25.6■■□□□ 1.69
TNRC18O15417 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
TNRC18O15417 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC25.6■■□□□ 1.69
TNRC18O15417 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.6■■□□□ 1.69
TNRC18O15417 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC25.6■■□□□ 1.69
TNRC18O15417 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
TNRC18O15417 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TNRC18O15417 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.59■■□□□ 1.69
TNRC18O15417 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.59■■□□□ 1.69
TNRC18O15417 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.59■■□□□ 1.69
TNRC18O15417 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TNRC18O15417 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TNRC18O15417 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.59■■□□□ 1.69
TNRC18O15417 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.59■■□□□ 1.69
TNRC18O15417 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.59■■□□□ 1.69
TNRC18O15417 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.59■■□□□ 1.69
TNRC18O15417 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.59■■□□□ 1.69
TNRC18O15417 WWOX-218ENST00000627394 894 ntTSL 5 BASIC25.59■■□□□ 1.69
TNRC18O15417 AL354811.1-201ENST00000610286 706 ntBASIC25.58■■□□□ 1.69
TNRC18O15417 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
TNRC18O15417 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
TNRC18O15417 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TNRC18O15417 MAX-217ENST00000557277 728 ntTSL 3 BASIC25.58■■□□□ 1.69
TNRC18O15417 MIR3181-201ENST00000578512 73 ntBASIC25.58■■□□□ 1.69
TNRC18O15417 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
TNRC18O15417 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TNRC18O15417 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.57■■□□□ 1.68
TNRC18O15417 AC126544.1-201ENST00000580842 1059 ntBASIC25.57■■□□□ 1.68
TNRC18O15417 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.57■■□□□ 1.68
TNRC18O15417 FAM201B-201ENST00000458407 597 ntBASIC25.57■■□□□ 1.68
TNRC18O15417 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.57■■□□□ 1.68
TNRC18O15417 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.56■■□□□ 1.68
TNRC18O15417 AL138781.1-201ENST00000566567 1274 ntBASIC25.56■■□□□ 1.68
TNRC18O15417 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TNRC18O15417 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
TNRC18O15417 AL596275.1-201ENST00000423464 877 ntBASIC25.56■■□□□ 1.68
TNRC18O15417 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TNRC18O15417 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC25.56■■□□□ 1.68
TNRC18O15417 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.56■■□□□ 1.68
TNRC18O15417 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.56■■□□□ 1.68
TNRC18O15417 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
TNRC18O15417 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TNRC18O15417 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
TNRC18O15417 AL449106.1-201ENST00000608517 1980 ntBASIC25.55■■□□□ 1.68
TNRC18O15417 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TNRC18O15417 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TNRC18O15417 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.55■■□□□ 1.68
TNRC18O15417 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TNRC18O15417 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.55■■□□□ 1.68
TNRC18O15417 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TNRC18O15417 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.55■■□□□ 1.68
TNRC18O15417 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.54■■□□□ 1.68
TNRC18O15417 MIR1224-201ENST00000408193 85 ntBASIC25.54■■□□□ 1.68
TNRC18O15417 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TNRC18O15417 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TNRC18O15417 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
TNRC18O15417 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TNRC18O15417 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC25.53■■□□□ 1.68
TNRC18O15417 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC25.53■■□□□ 1.68
TNRC18O15417 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.53■■□□□ 1.68
TNRC18O15417 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
TNRC18O15417 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TNRC18O15417 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
TNRC18O15417 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TNRC18O15417 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
TNRC18O15417 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC25.52■■□□□ 1.68
TNRC18O15417 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC25.52■■□□□ 1.68
TNRC18O15417 BID-214ENST00000617586 542 ntTSL 5 BASIC25.52■■□□□ 1.68
TNRC18O15417 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
TNRC18O15417 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TNRC18O15417 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
TNRC18O15417 SLC7A5P2-201ENST00000553010 536 ntBASIC25.51■■□□□ 1.67
TNRC18O15417 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.51■■□□□ 1.67
TNRC18O15417 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
TNRC18O15417 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TNRC18O15417 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
TNRC18O15417 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
TNRC18O15417 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.51■■□□□ 1.67
TNRC18O15417 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TNRC18O15417 AP004607.4-201ENST00000530158 1459 ntBASIC25.51■■□□□ 1.67
TNRC18O15417 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TNRC18O15417 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TNRC18O15417 AP005435.1-201ENST00000529293 1178 ntBASIC25.5■■□□□ 1.67
TNRC18O15417 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TNRC18O15417 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.5■■□□□ 1.67
TNRC18O15417 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TNRC18O15417 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC25.5■■□□□ 1.67
TNRC18O15417 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.5■■□□□ 1.67
TNRC18O15417 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.5■■□□□ 1.67
TNRC18O15417 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
TNRC18O15417 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms