Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDX4O14627 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDX4O14627 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDX4O14627 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.42■■□□□ 1.18
CDX4O14627 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.41■■□□□ 1.18
CDX4O14627 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.41■■□□□ 1.18
CDX4O14627 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.41■■□□□ 1.18
CDX4O14627 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CDX4O14627 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.41■■□□□ 1.18
CDX4O14627 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.41■■□□□ 1.18
CDX4O14627 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.41■■□□□ 1.18
CDX4O14627 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.41■■□□□ 1.18
CDX4O14627 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDX4O14627 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
CDX4O14627 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDX4O14627 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CDX4O14627 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.4■■□□□ 1.18
CDX4O14627 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDX4O14627 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CDX4O14627 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.4■■□□□ 1.18
CDX4O14627 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDX4O14627 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDX4O14627 ERN1-208ENST00000606895 2068 ntBASIC22.39■■□□□ 1.17
CDX4O14627 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
CDX4O14627 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CDX4O14627 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
CDX4O14627 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.39■■□□□ 1.17
CDX4O14627 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.39■■□□□ 1.17
CDX4O14627 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CDX4O14627 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CDX4O14627 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDX4O14627 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.38■■□□□ 1.17
CDX4O14627 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.38■■□□□ 1.17
CDX4O14627 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDX4O14627 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDX4O14627 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDX4O14627 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDX4O14627 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.37■■□□□ 1.17
CDX4O14627 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDX4O14627 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.37■■□□□ 1.17
CDX4O14627 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.37■■□□□ 1.17
CDX4O14627 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
CDX4O14627 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.37■■□□□ 1.17
CDX4O14627 AC126544.1-201ENST00000580842 1059 ntBASIC22.37■■□□□ 1.17
CDX4O14627 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CDX4O14627 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.37■■□□□ 1.17
CDX4O14627 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
CDX4O14627 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.37■■□□□ 1.17
CDX4O14627 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.37■■□□□ 1.17
CDX4O14627 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CDX4O14627 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
CDX4O14627 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.36■■□□□ 1.17
CDX4O14627 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.36■■□□□ 1.17
CDX4O14627 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
CDX4O14627 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDX4O14627 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CDX4O14627 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDX4O14627 AC009086.3-201ENST00000623486 1008 ntBASIC22.36■■□□□ 1.17
CDX4O14627 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDX4O14627 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDX4O14627 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.36■■□□□ 1.17
CDX4O14627 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CDX4O14627 AC123595.1-201ENST00000440769 1046 ntBASIC22.35■■□□□ 1.17
CDX4O14627 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.35■■□□□ 1.17
CDX4O14627 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDX4O14627 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CDX4O14627 TSPY26P-201ENST00000476365 1326 ntBASIC22.34■■□□□ 1.17
CDX4O14627 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CDX4O14627 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDX4O14627 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.34■■□□□ 1.17
CDX4O14627 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDX4O14627 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDX4O14627 AC027612.3-201ENST00000413684 1047 ntBASIC22.34■■□□□ 1.17
CDX4O14627 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDX4O14627 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDX4O14627 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
CDX4O14627 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
CDX4O14627 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDX4O14627 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDX4O14627 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDX4O14627 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDX4O14627 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.33■■□□□ 1.17
CDX4O14627 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.33■■□□□ 1.17
CDX4O14627 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDX4O14627 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDX4O14627 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CDX4O14627 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CDX4O14627 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDX4O14627 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.32■■□□□ 1.16
CDX4O14627 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.32■■□□□ 1.16
CDX4O14627 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.32■■□□□ 1.16
CDX4O14627 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.32■■□□□ 1.16
CDX4O14627 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.32■■□□□ 1.16
CDX4O14627 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.32■■□□□ 1.16
CDX4O14627 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
CDX4O14627 AL358852.1-201ENST00000623174 1268 ntBASIC22.32■■□□□ 1.16
CDX4O14627 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.32■■□□□ 1.16
CDX4O14627 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
CDX4O14627 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDX4O14627 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms