Protein–RNA interactions for Protein: O00233

PSMD9, 26S proteasome non-ATPase regulatory subunit 9, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD9O00233 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PSMD9O00233 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PSMD9O00233 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PSMD9O00233 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PSMD9O00233 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.33■□□□□ 0.84
PSMD9O00233 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PSMD9O00233 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.32■□□□□ 0.84
PSMD9O00233 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD9O00233 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD9O00233 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.32■□□□□ 0.84
PSMD9O00233 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PSMD9O00233 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD9O00233 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
PSMD9O00233 AC090877.2-201ENST00000558441 1738 ntBASIC20.32■□□□□ 0.84
PSMD9O00233 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD9O00233 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD9O00233 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD9O00233 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD9O00233 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.32■□□□□ 0.84
PSMD9O00233 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PSMD9O00233 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PSMD9O00233 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PSMD9O00233 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PSMD9O00233 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PSMD9O00233 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.31■□□□□ 0.84
PSMD9O00233 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PSMD9O00233 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
PSMD9O00233 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.31■□□□□ 0.84
PSMD9O00233 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PSMD9O00233 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PSMD9O00233 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PSMD9O00233 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PSMD9O00233 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PSMD9O00233 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PSMD9O00233 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.3■□□□□ 0.84
PSMD9O00233 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.3■□□□□ 0.84
PSMD9O00233 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PSMD9O00233 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PSMD9O00233 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PSMD9O00233 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.29■□□□□ 0.84
PSMD9O00233 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSMD9O00233 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSMD9O00233 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSMD9O00233 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PSMD9O00233 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PSMD9O00233 DUX4L9-201ENST00000449051 1259 ntBASIC20.29■□□□□ 0.84
PSMD9O00233 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PSMD9O00233 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.29■□□□□ 0.84
PSMD9O00233 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PSMD9O00233 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.29■□□□□ 0.84
PSMD9O00233 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.29■□□□□ 0.84
PSMD9O00233 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.29■□□□□ 0.84
PSMD9O00233 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSMD9O00233 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PSMD9O00233 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSMD9O00233 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSMD9O00233 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PSMD9O00233 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSMD9O00233 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSMD9O00233 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.28■□□□□ 0.84
PSMD9O00233 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PSMD9O00233 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PSMD9O00233 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PSMD9O00233 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.28■□□□□ 0.84
PSMD9O00233 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSMD9O00233 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSMD9O00233 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSMD9O00233 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PSMD9O00233 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PSMD9O00233 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PSMD9O00233 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSMD9O00233 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PSMD9O00233 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSMD9O00233 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
PSMD9O00233 AC087393.1-201ENST00000582896 145 ntBASIC20.27■□□□□ 0.84
PSMD9O00233 MIR6765-201ENST00000614092 87 ntBASIC20.27■□□□□ 0.84
PSMD9O00233 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSMD9O00233 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.27■□□□□ 0.84
PSMD9O00233 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PSMD9O00233 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSMD9O00233 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
PSMD9O00233 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PSMD9O00233 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSMD9O00233 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSMD9O00233 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PSMD9O00233 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PSMD9O00233 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
PSMD9O00233 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSMD9O00233 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PSMD9O00233 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
PSMD9O00233 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.26■□□□□ 0.83
PSMD9O00233 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSMD9O00233 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSMD9O00233 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSMD9O00233 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PSMD9O00233 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.25■□□□□ 0.83
PSMD9O00233 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PSMD9O00233 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.25■□□□□ 0.83
PSMD9O00233 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PSMD9O00233 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms