Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.1■■□□□ 1.29
AP3B1O00203 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
AP3B1O00203 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.1■■□□□ 1.29
AP3B1O00203 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
AP3B1O00203 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
AP3B1O00203 ALDH1A3-203ENST00000557963 1670 ntBASIC23.09■■□□□ 1.29
AP3B1O00203 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
AP3B1O00203 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
AP3B1O00203 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
AP3B1O00203 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
AP3B1O00203 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.09■■□□□ 1.29
AP3B1O00203 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
AP3B1O00203 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
AP3B1O00203 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.09■■□□□ 1.29
AP3B1O00203 MIR4281-201ENST00000580852 62 ntBASIC23.09■■□□□ 1.29
AP3B1O00203 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
AP3B1O00203 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
AP3B1O00203 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
AP3B1O00203 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.08■■□□□ 1.29
AP3B1O00203 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.08■■□□□ 1.29
AP3B1O00203 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.08■■□□□ 1.29
AP3B1O00203 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
AP3B1O00203 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.08■■□□□ 1.28
AP3B1O00203 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
AP3B1O00203 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
AP3B1O00203 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
AP3B1O00203 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
AP3B1O00203 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
AP3B1O00203 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
AP3B1O00203 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.07■■□□□ 1.28
AP3B1O00203 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
AP3B1O00203 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
AP3B1O00203 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
AP3B1O00203 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
AP3B1O00203 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
AP3B1O00203 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
AP3B1O00203 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.06■■□□□ 1.28
AP3B1O00203 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
AP3B1O00203 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
AP3B1O00203 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
AP3B1O00203 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
AP3B1O00203 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.06■■□□□ 1.28
AP3B1O00203 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
AP3B1O00203 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
AP3B1O00203 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.06■■□□□ 1.28
AP3B1O00203 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
AP3B1O00203 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
AP3B1O00203 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
AP3B1O00203 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
AP3B1O00203 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
AP3B1O00203 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
AP3B1O00203 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
AP3B1O00203 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
AP3B1O00203 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.05■■□□□ 1.28
AP3B1O00203 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
AP3B1O00203 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
AP3B1O00203 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
AP3B1O00203 AF131216.4-201ENST00000638924 1588 ntBASIC23.05■■□□□ 1.28
AP3B1O00203 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
AP3B1O00203 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
AP3B1O00203 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.04■■□□□ 1.28
AP3B1O00203 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
AP3B1O00203 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
AP3B1O00203 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.04■■□□□ 1.28
AP3B1O00203 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
AP3B1O00203 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
AP3B1O00203 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
AP3B1O00203 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.04■■□□□ 1.28
AP3B1O00203 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.04■■□□□ 1.28
AP3B1O00203 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.04■■□□□ 1.28
AP3B1O00203 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.04■■□□□ 1.28
AP3B1O00203 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.03■■□□□ 1.28
AP3B1O00203 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
AP3B1O00203 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
AP3B1O00203 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.03■■□□□ 1.28
AP3B1O00203 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
AP3B1O00203 AC012676.1-201ENST00000574705 1949 ntBASIC23.03■■□□□ 1.28
AP3B1O00203 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
AP3B1O00203 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.03■■□□□ 1.28
AP3B1O00203 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
AP3B1O00203 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
AP3B1O00203 YBX1P4-201ENST00000392794 808 ntBASIC23.02■■□□□ 1.28
AP3B1O00203 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.02■■□□□ 1.28
AP3B1O00203 AL033527.3-201ENST00000566366 1196 ntBASIC23.02■■□□□ 1.28
AP3B1O00203 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.02■■□□□ 1.28
AP3B1O00203 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
AP3B1O00203 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.02■■□□□ 1.28
AP3B1O00203 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.02■■□□□ 1.28
AP3B1O00203 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
AP3B1O00203 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
AP3B1O00203 AC092068.2-201ENST00000590491 1708 ntBASIC23.02■■□□□ 1.28
AP3B1O00203 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
AP3B1O00203 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.01■■□□□ 1.27
AP3B1O00203 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.01■■□□□ 1.27
AP3B1O00203 AC004448.1-201ENST00000458332 883 ntBASIC23.01■■□□□ 1.27
AP3B1O00203 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
AP3B1O00203 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.01■■□□□ 1.27
AP3B1O00203 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
AP3B1O00203 ANOS2P-203ENST00000472227 1816 ntBASIC23.01■■□□□ 1.27
AP3B1O00203 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms