Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CGB1A6NKQ9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CGB1A6NKQ9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.25■□□□□ 0.51
CGB1A6NKQ9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CGB1A6NKQ9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CGB1A6NKQ9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CGB1A6NKQ9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CGB1A6NKQ9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.25■□□□□ 0.51
CGB1A6NKQ9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CGB1A6NKQ9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.25■□□□□ 0.51
CGB1A6NKQ9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.25■□□□□ 0.51
CGB1A6NKQ9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CGB1A6NKQ9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CGB1A6NKQ9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CGB1A6NKQ9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CGB1A6NKQ9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CGB1A6NKQ9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.24■□□□□ 0.51
CGB1A6NKQ9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CGB1A6NKQ9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.24■□□□□ 0.51
CGB1A6NKQ9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CGB1A6NKQ9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.24■□□□□ 0.51
CGB1A6NKQ9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CGB1A6NKQ9 AL161729.1-201ENST00000604104 1402 ntBASIC18.23■□□□□ 0.51
CGB1A6NKQ9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CGB1A6NKQ9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.23■□□□□ 0.51
CGB1A6NKQ9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CGB1A6NKQ9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CGB1A6NKQ9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CGB1A6NKQ9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
CGB1A6NKQ9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.23■□□□□ 0.51
CGB1A6NKQ9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CGB1A6NKQ9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CGB1A6NKQ9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CGB1A6NKQ9 AC022616.5-201ENST00000518796 181 ntBASIC18.23■□□□□ 0.51
CGB1A6NKQ9 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.23■□□□□ 0.51
CGB1A6NKQ9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CGB1A6NKQ9 AC133561.1-201ENST00000568600 2415 ntBASIC18.23■□□□□ 0.51
CGB1A6NKQ9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CGB1A6NKQ9 AC131274.2-201ENST00000580697 1507 ntBASIC18.23■□□□□ 0.51
CGB1A6NKQ9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CGB1A6NKQ9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.22■□□□□ 0.51
CGB1A6NKQ9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CGB1A6NKQ9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.22■□□□□ 0.51
CGB1A6NKQ9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.22■□□□□ 0.51
CGB1A6NKQ9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CGB1A6NKQ9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CGB1A6NKQ9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.22■□□□□ 0.51
CGB1A6NKQ9 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.22■□□□□ 0.51
CGB1A6NKQ9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CGB1A6NKQ9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CGB1A6NKQ9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CGB1A6NKQ9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CGB1A6NKQ9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CGB1A6NKQ9 AC068473.5-201ENST00000616428 2072 ntBASIC18.21■□□□□ 0.51
CGB1A6NKQ9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CGB1A6NKQ9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.21■□□□□ 0.51
CGB1A6NKQ9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CGB1A6NKQ9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.21■□□□□ 0.51
CGB1A6NKQ9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.21■□□□□ 0.51
CGB1A6NKQ9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CGB1A6NKQ9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CGB1A6NKQ9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.21■□□□□ 0.51
CGB1A6NKQ9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CGB1A6NKQ9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CGB1A6NKQ9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
CGB1A6NKQ9 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.21■□□□□ 0.5
CGB1A6NKQ9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.2■□□□□ 0.5
CGB1A6NKQ9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CGB1A6NKQ9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.2■□□□□ 0.5
CGB1A6NKQ9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.2■□□□□ 0.5
CGB1A6NKQ9 TSPY13P-201ENST00000338964 914 ntBASIC18.2■□□□□ 0.5
CGB1A6NKQ9 AC120024.1-201ENST00000562672 995 ntBASIC18.2■□□□□ 0.5
CGB1A6NKQ9 BHLHE23-202ENST00000612929 1109 ntBASIC18.2■□□□□ 0.5
CGB1A6NKQ9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CGB1A6NKQ9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CGB1A6NKQ9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.2■□□□□ 0.5
CGB1A6NKQ9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CGB1A6NKQ9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.2■□□□□ 0.5
CGB1A6NKQ9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
CGB1A6NKQ9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CGB1A6NKQ9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.2■□□□□ 0.5
CGB1A6NKQ9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.19■□□□□ 0.5
CGB1A6NKQ9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CGB1A6NKQ9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.19■□□□□ 0.5
CGB1A6NKQ9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CGB1A6NKQ9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CGB1A6NKQ9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.19■□□□□ 0.5
CGB1A6NKQ9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.19■□□□□ 0.5
CGB1A6NKQ9 AC010980.1-201ENST00000587192 1142 ntBASIC18.19■□□□□ 0.5
CGB1A6NKQ9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CGB1A6NKQ9 AL022069.1-201ENST00000568025 1636 ntBASIC18.19■□□□□ 0.5
CGB1A6NKQ9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CGB1A6NKQ9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CGB1A6NKQ9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.18■□□□□ 0.5
CGB1A6NKQ9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CGB1A6NKQ9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CGB1A6NKQ9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.18■□□□□ 0.5
CGB1A6NKQ9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CGB1A6NKQ9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CGB1A6NKQ9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms