Protein–RNA interactions for Protein: A6NFQ2

TCAF2, TRPM8 channel-associated factor 2, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF2A6NFQ2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.59■■□□□ 1.37
TCAF2A6NFQ2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TCAF2A6NFQ2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.58■■□□□ 1.37
TCAF2A6NFQ2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TCAF2A6NFQ2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TCAF2A6NFQ2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.58■■□□□ 1.37
TCAF2A6NFQ2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.58■■□□□ 1.37
TCAF2A6NFQ2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TCAF2A6NFQ2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.58■■□□□ 1.36
TCAF2A6NFQ2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.57■■□□□ 1.36
TCAF2A6NFQ2 MIR3621-201ENST00000580529 85 ntBASIC23.57■■□□□ 1.36
TCAF2A6NFQ2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
TCAF2A6NFQ2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.57■■□□□ 1.36
TCAF2A6NFQ2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.57■■□□□ 1.36
TCAF2A6NFQ2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TCAF2A6NFQ2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TCAF2A6NFQ2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TCAF2A6NFQ2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
TCAF2A6NFQ2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.56■■□□□ 1.36
TCAF2A6NFQ2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TCAF2A6NFQ2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.56■■□□□ 1.36
TCAF2A6NFQ2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.56■■□□□ 1.36
TCAF2A6NFQ2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TCAF2A6NFQ2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TCAF2A6NFQ2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TCAF2A6NFQ2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
TCAF2A6NFQ2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.55■■□□□ 1.36
TCAF2A6NFQ2 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.55■■□□□ 1.36
TCAF2A6NFQ2 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.55■■□□□ 1.36
TCAF2A6NFQ2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TCAF2A6NFQ2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TCAF2A6NFQ2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
TCAF2A6NFQ2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TCAF2A6NFQ2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.55■■□□□ 1.36
TCAF2A6NFQ2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.55■■□□□ 1.36
TCAF2A6NFQ2 AL356740.2-201ENST00000601559 647 ntBASIC23.55■■□□□ 1.36
TCAF2A6NFQ2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TCAF2A6NFQ2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
TCAF2A6NFQ2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TCAF2A6NFQ2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.54■■□□□ 1.36
TCAF2A6NFQ2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TCAF2A6NFQ2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TCAF2A6NFQ2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.54■■□□□ 1.36
TCAF2A6NFQ2 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.54■■□□□ 1.36
TCAF2A6NFQ2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.54■■□□□ 1.36
TCAF2A6NFQ2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TCAF2A6NFQ2 AC005703.6-201ENST00000623265 1329 ntBASIC23.54■■□□□ 1.36
TCAF2A6NFQ2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TCAF2A6NFQ2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TCAF2A6NFQ2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.53■■□□□ 1.36
TCAF2A6NFQ2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TCAF2A6NFQ2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
TCAF2A6NFQ2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.53■■□□□ 1.36
TCAF2A6NFQ2 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.53■■□□□ 1.36
TCAF2A6NFQ2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.53■■□□□ 1.36
TCAF2A6NFQ2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TCAF2A6NFQ2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TCAF2A6NFQ2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TCAF2A6NFQ2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TCAF2A6NFQ2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TCAF2A6NFQ2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TCAF2A6NFQ2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TCAF2A6NFQ2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.52■■□□□ 1.36
TCAF2A6NFQ2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.52■■□□□ 1.36
TCAF2A6NFQ2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.52■■□□□ 1.36
TCAF2A6NFQ2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TCAF2A6NFQ2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TCAF2A6NFQ2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.52■■□□□ 1.36
TCAF2A6NFQ2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.52■■□□□ 1.36
TCAF2A6NFQ2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.51■■□□□ 1.35
TCAF2A6NFQ2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
TCAF2A6NFQ2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.51■■□□□ 1.35
TCAF2A6NFQ2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TCAF2A6NFQ2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TCAF2A6NFQ2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TCAF2A6NFQ2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TCAF2A6NFQ2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.5■■□□□ 1.35
TCAF2A6NFQ2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.5■■□□□ 1.35
TCAF2A6NFQ2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TCAF2A6NFQ2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TCAF2A6NFQ2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TCAF2A6NFQ2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TCAF2A6NFQ2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TCAF2A6NFQ2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.49■■□□□ 1.35
TCAF2A6NFQ2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.49■■□□□ 1.35
TCAF2A6NFQ2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TCAF2A6NFQ2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TCAF2A6NFQ2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
TCAF2A6NFQ2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TCAF2A6NFQ2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
TCAF2A6NFQ2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
TCAF2A6NFQ2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
TCAF2A6NFQ2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TCAF2A6NFQ2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.48■■□□□ 1.35
TCAF2A6NFQ2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TCAF2A6NFQ2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
TCAF2A6NFQ2 AL139125.2-201ENST00000623134 1869 ntBASIC23.48■■□□□ 1.35
TCAF2A6NFQ2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.48■■□□□ 1.35
TCAF2A6NFQ2 AC131281.2-201ENST00000520478 145 ntBASIC23.48■■□□□ 1.35
TCAF2A6NFQ2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms