Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRAV21A0A0B4J279 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV21A0A0B4J279 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV21A0A0B4J279 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV21A0A0B4J279 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV21A0A0B4J279 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRAV21A0A0B4J279 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV21A0A0B4J279 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV21A0A0B4J279 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV21A0A0B4J279 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV21A0A0B4J279 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRAV21A0A0B4J279 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
TRAV21A0A0B4J279 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV21A0A0B4J279 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV21A0A0B4J279 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV21A0A0B4J279 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV21A0A0B4J279 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV21A0A0B4J279 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV21A0A0B4J279 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV21A0A0B4J279 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV21A0A0B4J279 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
TRAV21A0A0B4J279 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV21A0A0B4J279 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV21A0A0B4J279 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV21A0A0B4J279 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV21A0A0B4J279 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV21A0A0B4J279 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV21A0A0B4J279 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAV21A0A0B4J279 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TRAV21A0A0B4J279 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV21A0A0B4J279 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
TRAV21A0A0B4J279 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAV21A0A0B4J279 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV21A0A0B4J279 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV21A0A0B4J279 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV21A0A0B4J279 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV21A0A0B4J279 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV21A0A0B4J279 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV21A0A0B4J279 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.94■□□□□ 0.3
TRAV21A0A0B4J279 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV21A0A0B4J279 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV21A0A0B4J279 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV21A0A0B4J279 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV21A0A0B4J279 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV21A0A0B4J279 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV21A0A0B4J279 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRAV21A0A0B4J279 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.94■□□□□ 0.3
TRAV21A0A0B4J279 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.94■□□□□ 0.3
TRAV21A0A0B4J279 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV21A0A0B4J279 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV21A0A0B4J279 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV21A0A0B4J279 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV21A0A0B4J279 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRAV21A0A0B4J279 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV21A0A0B4J279 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV21A0A0B4J279 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV21A0A0B4J279 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRAV21A0A0B4J279 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV21A0A0B4J279 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV21A0A0B4J279 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRAV21A0A0B4J279 AL592293.1-201ENST00000502889 1188 ntBASIC16.93■□□□□ 0.3
TRAV21A0A0B4J279 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV21A0A0B4J279 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV21A0A0B4J279 AC087393.1-201ENST00000582896 145 ntBASIC16.93■□□□□ 0.3
TRAV21A0A0B4J279 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV21A0A0B4J279 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV21A0A0B4J279 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV21A0A0B4J279 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV21A0A0B4J279 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV21A0A0B4J279 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV21A0A0B4J279 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
TRAV21A0A0B4J279 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV21A0A0B4J279 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRAV21A0A0B4J279 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV21A0A0B4J279 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
TRAV21A0A0B4J279 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.92■□□□□ 0.3
TRAV21A0A0B4J279 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV21A0A0B4J279 MIR6765-201ENST00000614092 87 ntBASIC16.92■□□□□ 0.3
TRAV21A0A0B4J279 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV21A0A0B4J279 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV21A0A0B4J279 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV21A0A0B4J279 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV21A0A0B4J279 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV21A0A0B4J279 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV21A0A0B4J279 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV21A0A0B4J279 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV21A0A0B4J279 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV21A0A0B4J279 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV21A0A0B4J279 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRAV21A0A0B4J279 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV21A0A0B4J279 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.91■□□□□ 0.3
TRAV21A0A0B4J279 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV21A0A0B4J279 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV21A0A0B4J279 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV21A0A0B4J279 AC079834.2-201ENST00000609776 1949 ntBASIC16.91■□□□□ 0.3
TRAV21A0A0B4J279 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV21A0A0B4J279 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV21A0A0B4J279 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV21A0A0B4J279 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV21A0A0B4J279 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms