Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRAV5A0A0B4J249 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV5A0A0B4J249 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV5A0A0B4J249 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV5A0A0B4J249 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAV5A0A0B4J249 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV5A0A0B4J249 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV5A0A0B4J249 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRAV5A0A0B4J249 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV5A0A0B4J249 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV5A0A0B4J249 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAV5A0A0B4J249 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV5A0A0B4J249 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRAV5A0A0B4J249 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV5A0A0B4J249 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRAV5A0A0B4J249 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.73■□□□□ 0.43
TRAV5A0A0B4J249 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TRAV5A0A0B4J249 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAV5A0A0B4J249 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV5A0A0B4J249 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV5A0A0B4J249 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV5A0A0B4J249 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV5A0A0B4J249 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV5A0A0B4J249 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV5A0A0B4J249 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV5A0A0B4J249 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV5A0A0B4J249 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV5A0A0B4J249 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV5A0A0B4J249 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV5A0A0B4J249 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.72■□□□□ 0.43
TRAV5A0A0B4J249 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TRAV5A0A0B4J249 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV5A0A0B4J249 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV5A0A0B4J249 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.72■□□□□ 0.43
TRAV5A0A0B4J249 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV5A0A0B4J249 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV5A0A0B4J249 C1orf229-201ENST00000623686 2258 ntBASIC17.72■□□□□ 0.43
TRAV5A0A0B4J249 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV5A0A0B4J249 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRAV5A0A0B4J249 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TRAV5A0A0B4J249 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV5A0A0B4J249 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV5A0A0B4J249 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV5A0A0B4J249 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV5A0A0B4J249 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV5A0A0B4J249 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.71■□□□□ 0.43
TRAV5A0A0B4J249 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
TRAV5A0A0B4J249 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV5A0A0B4J249 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRAV5A0A0B4J249 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRAV5A0A0B4J249 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAV5A0A0B4J249 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV5A0A0B4J249 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV5A0A0B4J249 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV5A0A0B4J249 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV5A0A0B4J249 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV5A0A0B4J249 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRAV5A0A0B4J249 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV5A0A0B4J249 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRAV5A0A0B4J249 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV5A0A0B4J249 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV5A0A0B4J249 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV5A0A0B4J249 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV5A0A0B4J249 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV5A0A0B4J249 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV5A0A0B4J249 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV5A0A0B4J249 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV5A0A0B4J249 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV5A0A0B4J249 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV5A0A0B4J249 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV5A0A0B4J249 DUSP8P3-201ENST00000399571 1760 ntBASIC17.68■□□□□ 0.42
TRAV5A0A0B4J249 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV5A0A0B4J249 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TRAV5A0A0B4J249 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV5A0A0B4J249 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV5A0A0B4J249 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV5A0A0B4J249 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
TRAV5A0A0B4J249 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.68■□□□□ 0.42
TRAV5A0A0B4J249 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV5A0A0B4J249 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV5A0A0B4J249 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV5A0A0B4J249 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
TRAV5A0A0B4J249 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV5A0A0B4J249 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV5A0A0B4J249 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV5A0A0B4J249 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV5A0A0B4J249 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV5A0A0B4J249 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV5A0A0B4J249 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV5A0A0B4J249 AC090877.2-201ENST00000558441 1738 ntBASIC17.67■□□□□ 0.42
TRAV5A0A0B4J249 AC092068.2-201ENST00000590491 1708 ntBASIC17.67■□□□□ 0.42
TRAV5A0A0B4J249 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV5A0A0B4J249 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV5A0A0B4J249 LINC00565-201ENST00000562710 2331 ntBASIC17.66■□□□□ 0.42
TRAV5A0A0B4J249 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV5A0A0B4J249 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV5A0A0B4J249 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV5A0A0B4J249 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV5A0A0B4J249 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV5A0A0B4J249 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms