Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV16A0A0A6YYK6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV16A0A0A6YYK6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRAV16A0A0A6YYK6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV16A0A0A6YYK6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC15.85■□□□□ 0.13
TRAV16A0A0A6YYK6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV16A0A0A6YYK6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC15.85■□□□□ 0.13
TRAV16A0A0A6YYK6 RP9P-202ENST00000450133 1212 ntBASIC15.85■□□□□ 0.13
TRAV16A0A0A6YYK6 AC007029.1-201ENST00000604183 313 ntBASIC15.85■□□□□ 0.13
TRAV16A0A0A6YYK6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TRAV16A0A0A6YYK6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV16A0A0A6YYK6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV16A0A0A6YYK6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV16A0A0A6YYK6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV16A0A0A6YYK6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV16A0A0A6YYK6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV16A0A0A6YYK6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV16A0A0A6YYK6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV16A0A0A6YYK6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV16A0A0A6YYK6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV16A0A0A6YYK6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV16A0A0A6YYK6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV16A0A0A6YYK6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV16A0A0A6YYK6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV16A0A0A6YYK6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV16A0A0A6YYK6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV16A0A0A6YYK6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV16A0A0A6YYK6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV16A0A0A6YYK6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV16A0A0A6YYK6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRAV16A0A0A6YYK6 RARRES2P2-201ENST00000394842 485 ntBASIC15.83■□□□□ 0.12
TRAV16A0A0A6YYK6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRAV16A0A0A6YYK6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAV16A0A0A6YYK6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
TRAV16A0A0A6YYK6 AC233723.2-201ENST00000623798 2106 ntBASIC15.83■□□□□ 0.12
TRAV16A0A0A6YYK6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV16A0A0A6YYK6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV16A0A0A6YYK6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAV16A0A0A6YYK6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRAV16A0A0A6YYK6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV16A0A0A6YYK6 C9orf163-202ENST00000624034 2573 ntBASIC15.82■□□□□ 0.12
TRAV16A0A0A6YYK6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV16A0A0A6YYK6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV16A0A0A6YYK6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV16A0A0A6YYK6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV16A0A0A6YYK6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV16A0A0A6YYK6 GFER-205ENST00000569451 517 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV16A0A0A6YYK6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRAV16A0A0A6YYK6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV16A0A0A6YYK6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRAV16A0A0A6YYK6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TRAV16A0A0A6YYK6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV16A0A0A6YYK6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV16A0A0A6YYK6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV16A0A0A6YYK6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV16A0A0A6YYK6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV16A0A0A6YYK6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TRAV16A0A0A6YYK6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV16A0A0A6YYK6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV16A0A0A6YYK6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV16A0A0A6YYK6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TRAV16A0A0A6YYK6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV16A0A0A6YYK6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC15.81■□□□□ 0.12
TRAV16A0A0A6YYK6 HES4-204ENST00000484667 667 ntTSL 3 BASIC15.81■□□□□ 0.12
TRAV16A0A0A6YYK6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV16A0A0A6YYK6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV16A0A0A6YYK6 AC137767.1-201ENST00000602918 1920 ntBASIC15.81■□□□□ 0.12
TRAV16A0A0A6YYK6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV16A0A0A6YYK6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV16A0A0A6YYK6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV16A0A0A6YYK6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV16A0A0A6YYK6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV16A0A0A6YYK6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV16A0A0A6YYK6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV16A0A0A6YYK6 AC093536.1-201ENST00000569153 554 ntBASIC15.8■□□□□ 0.12
TRAV16A0A0A6YYK6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRAV16A0A0A6YYK6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV16A0A0A6YYK6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV16A0A0A6YYK6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
TRAV16A0A0A6YYK6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV16A0A0A6YYK6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV16A0A0A6YYK6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV16A0A0A6YYK6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV16A0A0A6YYK6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV16A0A0A6YYK6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRAV16A0A0A6YYK6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV16A0A0A6YYK6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV16A0A0A6YYK6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAV16A0A0A6YYK6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV16A0A0A6YYK6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV16A0A0A6YYK6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV16A0A0A6YYK6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV16A0A0A6YYK6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV16A0A0A6YYK6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV16A0A0A6YYK6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
TRAV16A0A0A6YYK6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV16A0A0A6YYK6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAV16A0A0A6YYK6 AC127496.7-201ENST00000625110 1798 ntBASIC15.79■□□□□ 0.12
TRAV16A0A0A6YYK6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV16A0A0A6YYK6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms