Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV6-7A0A0A0MS04 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.16■□□□□ 0.66
TRBV6-7A0A0A0MS04 RNF126P1-201ENST00000567452 1320 ntBASIC19.16■□□□□ 0.66
TRBV6-7A0A0A0MS04 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV6-7A0A0A0MS04 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV6-7A0A0A0MS04 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TRBV6-7A0A0A0MS04 AC137767.1-201ENST00000602918 1920 ntBASIC19.15■□□□□ 0.66
TRBV6-7A0A0A0MS04 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.15■□□□□ 0.66
TRBV6-7A0A0A0MS04 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV6-7A0A0A0MS04 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV6-7A0A0A0MS04 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV6-7A0A0A0MS04 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
TRBV6-7A0A0A0MS04 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV6-7A0A0A0MS04 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV6-7A0A0A0MS04 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.15■□□□□ 0.66
TRBV6-7A0A0A0MS04 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV6-7A0A0A0MS04 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRBV6-7A0A0A0MS04 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV6-7A0A0A0MS04 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV6-7A0A0A0MS04 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
TRBV6-7A0A0A0MS04 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
TRBV6-7A0A0A0MS04 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.14■□□□□ 0.66
TRBV6-7A0A0A0MS04 AL024507.2-201ENST00000606070 2574 ntBASIC19.14■□□□□ 0.65
TRBV6-7A0A0A0MS04 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV6-7A0A0A0MS04 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV6-7A0A0A0MS04 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV6-7A0A0A0MS04 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.14■□□□□ 0.65
TRBV6-7A0A0A0MS04 AC018755.3-202ENST00000596210 929 ntBASIC19.14■□□□□ 0.65
TRBV6-7A0A0A0MS04 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRBV6-7A0A0A0MS04 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV6-7A0A0A0MS04 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV6-7A0A0A0MS04 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV6-7A0A0A0MS04 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV6-7A0A0A0MS04 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV6-7A0A0A0MS04 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV6-7A0A0A0MS04 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
TRBV6-7A0A0A0MS04 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.13■□□□□ 0.65
TRBV6-7A0A0A0MS04 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.13■□□□□ 0.65
TRBV6-7A0A0A0MS04 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV6-7A0A0A0MS04 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV6-7A0A0A0MS04 AC090877.2-201ENST00000558441 1738 ntBASIC19.13■□□□□ 0.65
TRBV6-7A0A0A0MS04 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.13■□□□□ 0.65
TRBV6-7A0A0A0MS04 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV6-7A0A0A0MS04 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV6-7A0A0A0MS04 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV6-7A0A0A0MS04 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
TRBV6-7A0A0A0MS04 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV6-7A0A0A0MS04 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV6-7A0A0A0MS04 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV6-7A0A0A0MS04 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
TRBV6-7A0A0A0MS04 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV6-7A0A0A0MS04 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV6-7A0A0A0MS04 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV6-7A0A0A0MS04 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV6-7A0A0A0MS04 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.12■□□□□ 0.65
TRBV6-7A0A0A0MS04 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRBV6-7A0A0A0MS04 AC127496.7-201ENST00000625110 1798 ntBASIC19.11■□□□□ 0.65
TRBV6-7A0A0A0MS04 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
TRBV6-7A0A0A0MS04 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV6-7A0A0A0MS04 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV6-7A0A0A0MS04 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV6-7A0A0A0MS04 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV6-7A0A0A0MS04 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRBV6-7A0A0A0MS04 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV6-7A0A0A0MS04 AL592293.1-201ENST00000502889 1188 ntBASIC19.11■□□□□ 0.65
TRBV6-7A0A0A0MS04 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.11■□□□□ 0.65
TRBV6-7A0A0A0MS04 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
TRBV6-7A0A0A0MS04 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.11■□□□□ 0.65
TRBV6-7A0A0A0MS04 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV6-7A0A0A0MS04 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV6-7A0A0A0MS04 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV6-7A0A0A0MS04 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRBV6-7A0A0A0MS04 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.1■□□□□ 0.65
TRBV6-7A0A0A0MS04 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV6-7A0A0A0MS04 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV6-7A0A0A0MS04 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV6-7A0A0A0MS04 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV6-7A0A0A0MS04 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
TRBV6-7A0A0A0MS04 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV6-7A0A0A0MS04 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.1■□□□□ 0.65
TRBV6-7A0A0A0MS04 SPCS2P3-201ENST00000500401 656 ntBASIC19.1■□□□□ 0.65
TRBV6-7A0A0A0MS04 AC087393.1-201ENST00000582896 145 ntBASIC19.1■□□□□ 0.65
TRBV6-7A0A0A0MS04 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV6-7A0A0A0MS04 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.1■□□□□ 0.65
TRBV6-7A0A0A0MS04 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV6-7A0A0A0MS04 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV6-7A0A0A0MS04 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV6-7A0A0A0MS04 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.09■□□□□ 0.65
TRBV6-7A0A0A0MS04 LINC00526-201ENST00000581067 1875 ntBASIC19.09■□□□□ 0.65
TRBV6-7A0A0A0MS04 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV6-7A0A0A0MS04 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV6-7A0A0A0MS04 AL592295.1-201ENST00000400984 884 ntBASIC19.09■□□□□ 0.65
TRBV6-7A0A0A0MS04 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.09■□□□□ 0.65
TRBV6-7A0A0A0MS04 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.09■□□□□ 0.65
TRBV6-7A0A0A0MS04 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV6-7A0A0A0MS04 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV6-7A0A0A0MS04 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.09■□□□□ 0.65
TRBV6-7A0A0A0MS04 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV6-7A0A0A0MS04 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV6-7A0A0A0MS04 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms