Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 SETD8P1-201ENST00000623146 1180 ntBASIC17.24■□□□□ 0.35
TRAV9-1A0A075B6T8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV9-1A0A075B6T8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV9-1A0A075B6T8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRAV9-1A0A075B6T8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV9-1A0A075B6T8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV9-1A0A075B6T8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV9-1A0A075B6T8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV9-1A0A075B6T8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAV9-1A0A075B6T8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
TRAV9-1A0A075B6T8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV9-1A0A075B6T8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV9-1A0A075B6T8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV9-1A0A075B6T8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRAV9-1A0A075B6T8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
TRAV9-1A0A075B6T8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV9-1A0A075B6T8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRAV9-1A0A075B6T8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRAV9-1A0A075B6T8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV9-1A0A075B6T8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV9-1A0A075B6T8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV9-1A0A075B6T8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV9-1A0A075B6T8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV9-1A0A075B6T8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV9-1A0A075B6T8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV9-1A0A075B6T8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV9-1A0A075B6T8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV9-1A0A075B6T8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV9-1A0A075B6T8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.22■□□□□ 0.35
TRAV9-1A0A075B6T8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV9-1A0A075B6T8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV9-1A0A075B6T8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV9-1A0A075B6T8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
TRAV9-1A0A075B6T8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV9-1A0A075B6T8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAV9-1A0A075B6T8 MIR6090-201ENST00000622481 60 ntBASIC17.22■□□□□ 0.35
TRAV9-1A0A075B6T8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV9-1A0A075B6T8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV9-1A0A075B6T8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV9-1A0A075B6T8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV9-1A0A075B6T8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV9-1A0A075B6T8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRAV9-1A0A075B6T8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV9-1A0A075B6T8 MIR762-201ENST00000390236 83 ntBASIC17.21■□□□□ 0.35
TRAV9-1A0A075B6T8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV9-1A0A075B6T8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV9-1A0A075B6T8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV9-1A0A075B6T8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV9-1A0A075B6T8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV9-1A0A075B6T8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV9-1A0A075B6T8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV9-1A0A075B6T8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV9-1A0A075B6T8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRAV9-1A0A075B6T8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV9-1A0A075B6T8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRAV9-1A0A075B6T8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV9-1A0A075B6T8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV9-1A0A075B6T8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV9-1A0A075B6T8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRAV9-1A0A075B6T8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRAV9-1A0A075B6T8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV9-1A0A075B6T8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV9-1A0A075B6T8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV9-1A0A075B6T8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV9-1A0A075B6T8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV9-1A0A075B6T8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV9-1A0A075B6T8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV9-1A0A075B6T8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV9-1A0A075B6T8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.19■□□□□ 0.34
TRAV9-1A0A075B6T8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV9-1A0A075B6T8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRAV9-1A0A075B6T8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV9-1A0A075B6T8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV9-1A0A075B6T8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV9-1A0A075B6T8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV9-1A0A075B6T8 AL359504.2-201ENST00000605506 1601 ntBASIC17.18■□□□□ 0.34
TRAV9-1A0A075B6T8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV9-1A0A075B6T8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV9-1A0A075B6T8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAV9-1A0A075B6T8 CHML-205ENST00000638160 705 ntTSL 3 BASIC17.18■□□□□ 0.34
TRAV9-1A0A075B6T8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV9-1A0A075B6T8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
TRAV9-1A0A075B6T8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV9-1A0A075B6T8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRAV9-1A0A075B6T8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV9-1A0A075B6T8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV9-1A0A075B6T8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV9-1A0A075B6T8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.17■□□□□ 0.34
TRAV9-1A0A075B6T8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV9-1A0A075B6T8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
TRAV9-1A0A075B6T8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV9-1A0A075B6T8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC17.17■□□□□ 0.34
TRAV9-1A0A075B6T8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV9-1A0A075B6T8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV9-1A0A075B6T8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAV9-1A0A075B6T8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV9-1A0A075B6T8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV9-1A0A075B6T8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV9-1A0A075B6T8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV9-1A0A075B6T8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms