Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 NIN-202ENST00000324330 4364 ntTSL 5 BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.03■□□□□ 0.48
DDX49Q9Y6V7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 USP32P1-208ENST00000506594 1164 ntBASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 AL359711.2-201ENST00000563105 872 ntBASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 RRP7BP-205ENST00000566851 833 ntBASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 MIR6805-201ENST00000615055 62 ntBASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
DDX49Q9Y6V7 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
DDX49Q9Y6V7 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DDX49Q9Y6V7 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC18.02■□□□□ 0.47
DDX49Q9Y6V7 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
DDX49Q9Y6V7 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
DDX49Q9Y6V7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 AC005252.3-201ENST00000623855 2258 ntBASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 RPL5P21-201ENST00000404620 815 ntBASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 AC007389.4-201ENST00000454674 793 ntBASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 AC106886.1-201ENST00000568660 600 ntBASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
DDX49Q9Y6V7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms