Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 HMGA1P7-201ENST00000406908 502 ntBASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 KRT18P31-201ENST00000506277 1292 ntBASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 AC097359.3-201ENST00000603982 1210 ntBASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 KRT8P37-201ENST00000451609 1420 ntBASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 BX324167.2-201ENST00000623717 3316 ntBASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 AC015819.3-201ENST00000624305 2674 ntBASIC11.32□□□□□ -0.6
TRAPPC1Q9Y5R8 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 AC090643.2-201ENST00000623442 2029 ntBASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 NMU-205ENST00000511469 756 ntTSL 3 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 AC011498.5-201ENST00000592027 486 ntBASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 AP005117.1-201ENST00000584346 1413 ntBASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 MKRN5P-201ENST00000445263 1467 ntBASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC11.31□□□□□ -0.6
TRAPPC1Q9Y5R8 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms