Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 AL158070.2-201ENST00000623713 1621 ntBASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
UBE2D4Q9Y2X8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 AC020910.6-201ENST00000623084 1459 ntBASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 LSS-211ENST00000522411 2523 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 AL645937.2-201ENST00000396808 931 ntBASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 DNAJB3-201ENST00000446806 729 ntBASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 POLD2P1-201ENST00000511220 997 ntBASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 GPX4-206ENST00000588919 803 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC10.43□□□□□ -0.74
UBE2D4Q9Y2X8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 MAPT-IT1-201ENST00000624111 3016 ntBASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 TUBB3P1-201ENST00000405796 1332 ntBASIC10.42□□□□□ -0.74
UBE2D4Q9Y2X8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms