Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 AL022323.5-201ENST00000624101 2059 ntBASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 KRT18P34-201ENST00000488218 1270 ntBASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 PGAM5P1-201ENST00000518923 814 ntBASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 AC097359.3-201ENST00000603982 1210 ntBASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 AC004790.2-201ENST00000623588 572 ntBASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 POM121L14P-201ENST00000406100 1558 ntBASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRCH1Q9Y2L9 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 PEG13-201ENST00000631594 5667 ntBASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 AC072061.1-201ENST00000569710 2234 ntBASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 HNRNPUP1-201ENST00000554987 333 ntBASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 MIR4515-201ENST00000584082 81 ntBASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 GOLGA2P5-201ENST00000266746 2395 ntBASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LRCH1Q9Y2L9 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms