Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 DRD5P1-201ENST00000456605 1438 ntBASIC14.36□□□□□ -0.11
LHX6Q9UPM6 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 SNORA72.3-201ENST00000365074 132 ntBASIC14.36□□□□□ -0.11
LHX6Q9UPM6 DPM3-202ENST00000368399 517 ntBASIC14.36□□□□□ -0.11
LHX6Q9UPM6 MRPL47-202ENST00000392659 673 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 USP9YP19-201ENST00000412165 485 ntBASIC14.36□□□□□ -0.11
LHX6Q9UPM6 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 AGPAT5P1-201ENST00000455855 1019 ntBASIC14.36□□□□□ -0.11
LHX6Q9UPM6 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 MTND6P32-201ENST00000457611 483 ntBASIC14.36□□□□□ -0.11
LHX6Q9UPM6 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 AC010460.2-201ENST00000509054 677 ntBASIC14.36□□□□□ -0.11
LHX6Q9UPM6 FAM86KP-201ENST00000509817 987 ntBASIC14.36□□□□□ -0.11
LHX6Q9UPM6 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 AL731537.2-201ENST00000561565 951 ntBASIC14.36□□□□□ -0.11
LHX6Q9UPM6 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 MIR4649-201ENST00000582839 64 ntBASIC14.36□□□□□ -0.11
LHX6Q9UPM6 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 AL023803.2-201ENST00000620080 638 ntBASIC14.36□□□□□ -0.11
LHX6Q9UPM6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LHX6Q9UPM6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 MTND4P13-201ENST00000402078 1023 ntBASIC14.35□□□□□ -0.11
LHX6Q9UPM6 ZNF92P1Y-201ENST00000415010 1191 ntBASIC14.35□□□□□ -0.11
LHX6Q9UPM6 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 AL133325.2-201ENST00000431034 449 ntTSL 2 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 DDX39AP1-201ENST00000445147 1181 ntBASIC14.35□□□□□ -0.11
LHX6Q9UPM6 AC092685.1-201ENST00000447960 1243 ntBASIC14.35□□□□□ -0.11
LHX6Q9UPM6 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 C2orf69P1-201ENST00000563532 1093 ntBASIC14.35□□□□□ -0.11
LHX6Q9UPM6 DNM1P30-201ENST00000563586 452 ntBASIC14.35□□□□□ -0.11
LHX6Q9UPM6 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 BNIP3P40-201ENST00000596017 556 ntBASIC14.35□□□□□ -0.11
LHX6Q9UPM6 AC103810.10-201ENST00000606504 343 ntBASIC14.35□□□□□ -0.11
LHX6Q9UPM6 AL139022.2-201ENST00000606934 443 ntBASIC14.35□□□□□ -0.11
LHX6Q9UPM6 MIR6842-201ENST00000612539 65 ntBASIC14.35□□□□□ -0.11
LHX6Q9UPM6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.35□□□□□ -0.11
LHX6Q9UPM6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms