Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 AC136604.1-201ENST00000418535 575 ntBASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 CD63-204ENST00000546939 779 ntTSL 3 BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 AP000842.3-202ENST00000569238 1080 ntBASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 AC011467.4-201ENST00000594891 528 ntBASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 AC091812.2-201ENST00000619081 385 ntBASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RPH3ALQ9UNE2 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RPH3ALQ9UNE2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RPH3ALQ9UNE2 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RPH3ALQ9UNE2 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RPH3ALQ9UNE2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC11.77□□□□□ -0.52
RPH3ALQ9UNE2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.77□□□□□ -0.52
RPH3ALQ9UNE2 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
RPH3ALQ9UNE2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.77□□□□□ -0.52
RPH3ALQ9UNE2 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC11.77□□□□□ -0.52
RPH3ALQ9UNE2 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
RPH3ALQ9UNE2 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RPH3ALQ9UNE2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RPH3ALQ9UNE2 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
RPH3ALQ9UNE2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RPH3ALQ9UNE2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
RPH3ALQ9UNE2 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
RPH3ALQ9UNE2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.77□□□□□ -0.52
RPH3ALQ9UNE2 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 FAM58CP-201ENST00000435741 640 ntBASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 FAAHP1-202ENST00000446499 1238 ntBASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 TIMM8BP1-201ENST00000452384 211 ntBASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 AC034105.1-201ENST00000563488 319 ntBASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 AC092865.6-201ENST00000642101 219 ntBASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 AC136759.1-202ENST00000530858 2194 ntBASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RPH3ALQ9UNE2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPH3ALQ9UNE2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.76□□□□□ -0.53
RPH3ALQ9UNE2 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPH3ALQ9UNE2 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPH3ALQ9UNE2 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
RPH3ALQ9UNE2 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
RPH3ALQ9UNE2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms