Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC093028.1-201ENST00000622998 982 ntBASIC14.14□□□□□ -0.15
VAPAQ9P0L0 BX539320.1-201ENST00000623759 877 ntBASIC14.14□□□□□ -0.15
VAPAQ9P0L0 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
VAPAQ9P0L0 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 AL137784.3-201ENST00000623858 2288 ntBASIC14.13□□□□□ -0.15
VAPAQ9P0L0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 IGHV3-42-201ENST00000520410 361 ntBASIC14.13□□□□□ -0.15
VAPAQ9P0L0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 AC092364.2-202ENST00000597012 1073 ntBASIC14.13□□□□□ -0.15
VAPAQ9P0L0 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.13□□□□□ -0.15
VAPAQ9P0L0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 AC023310.3-201ENST00000557027 670 ntBASIC14.12□□□□□ -0.15
VAPAQ9P0L0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 AC100756.1-201ENST00000562736 682 ntBASIC14.12□□□□□ -0.15
VAPAQ9P0L0 AC104794.3-201ENST00000566840 1248 ntBASIC14.12□□□□□ -0.15
VAPAQ9P0L0 AC138749.3-201ENST00000567691 622 ntBASIC14.12□□□□□ -0.15
VAPAQ9P0L0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 BRI3BPP1-201ENST00000594224 787 ntBASIC14.12□□□□□ -0.15
VAPAQ9P0L0 AC116165.1-201ENST00000611806 668 ntBASIC14.12□□□□□ -0.15
VAPAQ9P0L0 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAPAQ9P0L0 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms