Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 FAM58CP-201ENST00000435741 640 ntBASIC12.81□□□□□ -0.36
COMMD9Q9P000 TPT1P11-201ENST00000458482 498 ntBASIC12.81□□□□□ -0.36
COMMD9Q9P000 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 HNRNPUP1-201ENST00000554987 333 ntBASIC12.81□□□□□ -0.36
COMMD9Q9P000 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 AC140113.2-201ENST00000604370 208 ntBASIC12.81□□□□□ -0.36
COMMD9Q9P000 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD9Q9P000 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.81□□□□□ -0.36
COMMD9Q9P000 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD9Q9P000 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 AL591122.2-201ENST00000624125 1853 ntBASIC12.8□□□□□ -0.36
COMMD9Q9P000 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD9Q9P000 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD9Q9P000 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD9Q9P000 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD9Q9P000 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD9Q9P000 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD9Q9P000 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD9Q9P000 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD9Q9P000 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD9Q9P000 AL590627.1-203ENST00000421194 1026 ntBASIC12.8□□□□□ -0.36
COMMD9Q9P000 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD9Q9P000 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD9Q9P000 AC026120.1-201ENST00000611536 926 ntBASIC12.8□□□□□ -0.36
COMMD9Q9P000 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD9Q9P000 AC092902.6-201ENST00000641783 218 ntBASIC12.8□□□□□ -0.36
COMMD9Q9P000 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD9Q9P000 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD9Q9P000 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.8□□□□□ -0.36
COMMD9Q9P000 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 231.9 ms