Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 TP53TG3HP-202ENST00000569755 579 ntBASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 AC017083.2-201ENST00000608069 979 ntBASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCM2LQ9NUG4 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 AC007541.1-201ENST00000570282 1469 ntBASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CCM2LQ9NUG4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 AC074338.1-201ENST00000416825 156 ntBASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 SLED1-202ENST00000512051 380 ntBASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 AC010336.2-201ENST00000564226 506 ntBASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 SPDYE12P-201ENST00000618416 771 ntBASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.27□□□□□ -0.13
CCM2LQ9NUG4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCM2LQ9NUG4 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms