Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
C12orf4Q9NQ89 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 AC018442.1-201ENST00000421439 2061 ntBASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 REXO1L1P-201ENST00000379010 6598 ntBASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 FO393414.2-201ENST00000405153 598 ntBASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 AC011467.4-201ENST00000594891 528 ntBASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 AC105206.1-202ENST00000314927 2368 ntBASIC13.12□□□□□ -0.31
C12orf4Q9NQ89 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 PCDHB17P-202ENST00000623466 3066 ntBASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 MKNK2P1-201ENST00000437526 628 ntBASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
C12orf4Q9NQ89 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms