Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.82■□□□□ 0.12
CD248Q9HCU0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CD248Q9HCU0 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.82■□□□□ 0.12
CD248Q9HCU0 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD248Q9HCU0 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.82■□□□□ 0.12
CD248Q9HCU0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD248Q9HCU0 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD248Q9HCU0 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD248Q9HCU0 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD248Q9HCU0 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD248Q9HCU0 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD248Q9HCU0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD248Q9HCU0 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD248Q9HCU0 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD248Q9HCU0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD248Q9HCU0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD248Q9HCU0 GAPDHP40-201ENST00000505218 1006 ntBASIC15.81■□□□□ 0.12
CD248Q9HCU0 AC106760.1-201ENST00000508690 800 ntBASIC15.81■□□□□ 0.12
CD248Q9HCU0 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD248Q9HCU0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD248Q9HCU0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD248Q9HCU0 AC112693.3-201ENST00000624819 1983 ntBASIC15.81■□□□□ 0.12
CD248Q9HCU0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD248Q9HCU0 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD248Q9HCU0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD248Q9HCU0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC15.81■□□□□ 0.12
CD248Q9HCU0 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD248Q9HCU0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 AC007551.1-201ENST00000457394 519 ntBASIC15.8■□□□□ 0.12
CD248Q9HCU0 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 FTH1P14-201ENST00000482930 551 ntBASIC15.8■□□□□ 0.12
CD248Q9HCU0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 AC015910.1-201ENST00000579400 975 ntBASIC15.8■□□□□ 0.12
CD248Q9HCU0 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 MIR6869-201ENST00000619434 62 ntBASIC15.8■□□□□ 0.12
CD248Q9HCU0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 PCDHA3-202ENST00000532566 4594 ntBASIC15.8■□□□□ 0.12
CD248Q9HCU0 AC089987.1-201ENST00000551654 2209 ntBASIC15.8■□□□□ 0.12
CD248Q9HCU0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD248Q9HCU0 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CD248Q9HCU0 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms