Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 AC092902.6-201ENST00000641783 218 ntBASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 REXO1L4P-201ENST00000605109 1937 ntBASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 AL356585.2-201ENST00000625078 2396 ntBASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC10.07□□□□□ -0.8
SND1-IT1Q9HBX3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 AC105206.1-202ENST00000314927 2368 ntBASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 AC022447.6-201ENST00000515522 438 ntBASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 KRT8P48-201ENST00000515599 1220 ntBASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 SLC25A39P2-201ENST00000537614 270 ntBASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SND1-IT1Q9HBX3 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SND1-IT1Q9HBX3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms