| VPS39 | Q96JC1 | AC134915.1-201 | ENST00000426461 | 574 nt | BASIC | 15.02 | ■□□□□ -0 | | |
| VPS39 | Q96JC1 | AL589986.1-201 | ENST00000429230 | 789 nt | TSL 5 BASIC | 15.02 | ■□□□□ -0 | | |
| VPS39 | Q96JC1 | TMEM176B-202 | ENST00000429904 | 1206 nt | APPRIS P1 TSL 2 BASIC | 15.02 | ■□□□□ -0 | | |
| VPS39 | Q96JC1 | UBE2V2-201 | ENST00000517630 | 612 nt | TSL 4 BASIC | 15.02 | ■□□□□ -0 | | |
| VPS39 | Q96JC1 | LINC01481-203 | ENST00000549651 | 883 nt | TSL 2 BASIC | 15.02 | ■□□□□ -0 | | |
| VPS39 | Q96JC1 | DUX4L47-201 | ENST00000566374 | 394 nt | BASIC | 15.02 | ■□□□□ -0 | | |
| VPS39 | Q96JC1 | AC120045.2-201 | ENST00000567334 | 178 nt | BASIC | 15.02 | ■□□□□ -0 | | |
| VPS39 | Q96JC1 | MIF4GD-206 | ENST00000579119 | 856 nt | TSL 3 BASIC | 15.02 | ■□□□□ -0 | | |
| VPS39 | Q96JC1 | AC005262.2-201 | ENST00000587701 | 452 nt | TSL 5 BASIC | 15.02 | ■□□□□ -0 | | |
| VPS39 | Q96JC1 | ELOF1-206 | ENST00000590700 | 585 nt | APPRIS P1 TSL 3 BASIC | 15.02 | ■□□□□ -0 | | |
| VPS39 | Q96JC1 | AC007431.3-201 | ENST00000623221 | 587 nt | BASIC | 15.02 | ■□□□□ -0 | | |
| VPS39 | Q96JC1 | WDR45-230 | ENST00000634559 | 1192 nt | TSL 5 BASIC | 15.02 | ■□□□□ -0 | | |
| VPS39 | Q96JC1 | SPPL2A-201 | ENST00000261854 | 7372 nt | APPRIS P1 TSL 1 (best) BASIC | 15.02 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | LINC01285-201 | ENST00000412422 | 2289 nt | TSL 2 BASIC | 15.02 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | MYLK-208 | ENST00000475616 | 5745 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.02 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | TNIK-202 | ENST00000341852 | 4727 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.02 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | PEG13-201 | ENST00000631594 | 5667 nt | BASIC | 15.02 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | POLD3-208 | ENST00000532497 | 1700 nt | TSL 1 (best) BASIC | 15.02 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | TMPRSS4-214 | ENST00000523251 | 1689 nt | APPRIS ALT2 TSL 2 BASIC | 15.02 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | XRCC3-211 | ENST00000555055 | 2584 nt | APPRIS P1 TSL 1 (best) BASIC | 15.02 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | RHD-206 | ENST00000423810 | 1637 nt | TSL 1 (best) BASIC | 15.02 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | MEOX2-201 | ENST00000262041 | 2500 nt | APPRIS P1 TSL 1 (best) BASIC | 15.02 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | GCFC2-211 | ENST00000541687 | 4318 nt | TSL 2 BASIC | 15.02 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | NCAPH2-201 | ENST00000299821 | 1996 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.02 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | PNPLA3-201 | ENST00000216180 | 2805 nt | APPRIS P1 TSL 1 (best) BASIC | 15.02 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | LMX1B-202 | ENST00000373474 | 5797 nt | TSL 1 (best) BASIC | 15.02 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | GPR132-203 | ENST00000539291 | 2779 nt | APPRIS P3 TSL 2 BASIC | 15.02 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | POU6F1-208 | ENST00000550824 | 2664 nt | TSL 5 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | USP3-204 | ENST00000540797 | 5474 nt | TSL 2 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | TRAF3-202 | ENST00000351691 | 2239 nt | TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | ZNF79-202 | ENST00000543471 | 2194 nt | TSL 2 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | ZNF79-203 | ENST00000612342 | 2192 nt | TSL 2 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | PRELP-201 | ENST00000343110 | 5747 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | TBP-207 | ENST00000616883 | 1750 nt | APPRIS ALT2 TSL 5 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | GABRB3-219 | ENST00000636466 | 4509 nt | TSL 5 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | AC090099.1-203 | ENST00000527059 | 2945 nt | TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | LINC00475-202 | ENST00000416438 | 2506 nt | TSL 2 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | CYP1A1-207 | ENST00000567032 | 2107 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | CDKN1A-208 | ENST00000615513 | 2102 nt | APPRIS P1 TSL 2 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | AC041040.2-201 | ENST00000622926 | 2899 nt | BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | CUEDC1-206 | ENST00000577830 | 3621 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | CRLS1-201 | ENST00000378863 | 3958 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | FAM120A-202 | ENST00000375389 | 3585 nt | TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | AL928921.2-201 | ENST00000641325 | 2442 nt | BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | CYLD-202 | ENST00000398568 | 3536 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | FHOD3-201 | ENST00000257209 | 4967 nt | APPRIS P3 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | PLAT-205 | ENST00000519510 | 2030 nt | TSL 5 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | OSTC-201 | ENST00000361564 | 1077 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | GGCT-205 | ENST00000409436 | 954 nt | TSL 3 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | PMS2P2-201 | ENST00000425039 | 1128 nt | BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | SHBG-204 | ENST00000441599 | 973 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | GNAQP1-201 | ENST00000444815 | 1067 nt | BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | RNA5SP421-201 | ENST00000516864 | 134 nt | BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | ZNF7-206 | ENST00000528130 | 1134 nt | TSL 5 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | AC055876.2-201 | ENST00000531834 | 546 nt | BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | AC125603.3-201 | ENST00000550742 | 486 nt | TSL 3 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | DUT-210 | ENST00000559935 | 569 nt | TSL 3 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | SPDYE22P-201 | ENST00000582158 | 798 nt | BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | AC005306.1-201 | ENST00000587498 | 661 nt | TSL 3 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | AC005785.1-202 | ENST00000597164 | 237 nt | TSL 3 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | SWI5-206 | ENST00000608796 | 906 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | PDCD6-212 | ENST00000614778 | 1050 nt | TSL 2 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | PCDHA5-201 | ENST00000529619 | 4157 nt | TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | RABL2A-206 | ENST00000409842 | 1979 nt | TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | ITPK1-207 | ENST00000555495 | 3035 nt | TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | COL8A2-201 | ENST00000303143 | 4447 nt | APPRIS P1 TSL 2 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | SH3KBP1-201 | ENST00000379697 | 1944 nt | TSL 5 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | ALDOA-209 | ENST00000563060 | 1550 nt | APPRIS P2 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | OPA1-205 | ENST00000361908 | 6439 nt | APPRIS P3 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | TOM1L1-201 | ENST00000348161 | 1895 nt | TSL 2 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | MLXIPL-203 | ENST00000354613 | 3215 nt | TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | ANKRD13B-201 | ENST00000394859 | 3214 nt | APPRIS P1 TSL 2 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | CFAP46-202 | ENST00000368586 | 8278 nt | APPRIS P2 TSL 5 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | NDUFC2-201 | ENST00000281031 | 2518 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | CCP110-203 | ENST00000396212 | 5549 nt | APPRIS P3 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | MAP3K11-208 | ENST00000530153 | 2830 nt | TSL 2 BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | KLK6-203 | ENST00000391808 | 1478 nt | TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | MAX-219 | ENST00000618858 | 2141 nt | TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | NOC2L-201 | ENST00000327044 | 2790 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | KIF21B-201 | ENST00000332129 | 9897 nt | TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | SHTN1-204 | ENST00000392903 | 2400 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | ARAP3-201 | ENST00000239440 | 5250 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | CCNF-202 | ENST00000397066 | 4283 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | SERTAD2-201 | ENST00000313349 | 5549 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | PRDM15-201 | ENST00000269844 | 4881 nt | APPRIS P3 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | G3BP2-202 | ENST00000359707 | 4883 nt | APPRIS P4 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | OXA1L-201 | ENST00000285848 | 1719 nt | TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | KIAA0319-204 | ENST00000537886 | 6622 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | DISC1-222 | ENST00000622252 | 6927 nt | APPRIS ALT2 TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | ASNA1-204 | ENST00000591090 | 1368 nt | APPRIS P1 TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | CCDC47-201 | ENST00000225726 | 3466 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | FBXO5-202 | ENST00000367241 | 2221 nt | TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | ARMCX6-208 | ENST00000539247 | 1928 nt | APPRIS P1 TSL 4 BASIC | 15 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | CAMK2B-206 | ENST00000353625 | 1624 nt | APPRIS ALT1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | ZNF256-201 | ENST00000282308 | 2172 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | ARMC5-202 | ENST00000408912 | 3626 nt | APPRIS ALT2 TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | CDKL3-206 | ENST00000521118 | 2160 nt | APPRIS ALT2 TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | SLC4A8-204 | ENST00000514353 | 3041 nt | TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | RPARP-AS1-202 | ENST00000492465 | 1556 nt | TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| VPS39 | Q96JC1 | RNU1-114P-201 | ENST00000365297 | 166 nt | BASIC | 15 | □□□□□ -0.01 | | |