Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 MCCD1P2-201ENST00000423228 335 ntBASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 AC142381.1-201ENST00000426099 345 ntBASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 AC008267.7-201ENST00000624570 1194 ntBASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP6Q96FZ7 C2-206ENST00000442278 2434 ntTSL 2 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 AC004832.2-201ENST00000426397 482 ntBASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 HTR5BP-201ENST00000430851 1154 ntBASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 CEND1P1-201ENST00000451006 455 ntBASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 C20orf181-201ENST00000623918 480 ntBASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP6Q96FZ7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.08■□□□□ 0.01
CHMP6Q96FZ7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CHMP6Q96FZ7 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CHMP6Q96FZ7 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.08■□□□□ 0.01
CHMP6Q96FZ7 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0.01
CHMP6Q96FZ7 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CHMP6Q96FZ7 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0.01
CHMP6Q96FZ7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CHMP6Q96FZ7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CHMP6Q96FZ7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.08■□□□□ 0.01
CHMP6Q96FZ7 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms