Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 MYO15B-237ENST00000642007 4893 ntBASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAM1L1Q8N609 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 AL354702.1-201ENST00000442006 1960 ntBASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 AL390755.1-201ENST00000623716 2027 ntBASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAM1L1Q8N609 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 AL590440.2-201ENST00000641973 1595 ntBASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 REXO1L6P-201ENST00000603433 1515 ntBASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 BRWD1P1-201ENST00000401091 371 ntBASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 AL354877.1-201ENST00000424412 413 ntBASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 AL035414.1-201ENST00000451327 857 ntBASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 CICP12-201ENST00000455801 843 ntBASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAM1L1Q8N609 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms