Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 AC104457.1-201ENST00000401024 814 ntBASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 AL590640.2-201ENST00000457038 527 ntBASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 AC004066.1-201ENST00000502488 802 ntBASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 ZNF767P-206ENST00000513792 565 ntBASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 MIR4741-201ENST00000579822 90 ntBASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 AC068587.10-201ENST00000641210 219 ntBASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC33Q8N5R6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 AL137783.1-201ENST00000623494 1896 ntBASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 KRT8P35-201ENST00000483942 1338 ntBASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 GPAA1P2-201ENST00000417923 928 ntBASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 C2orf69P2-201ENST00000562032 1123 ntBASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC33Q8N5R6 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms