Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 AC103702.1-201ENST00000548801 2630 ntBASIC22.9■■□□□ 1.26
VPS8Q8N3P4 AC232323.1-201ENST00000540724 2099 ntBASIC22.9■■□□□ 1.26
VPS8Q8N3P4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 AC005586.2-201ENST00000563946 837 ntBASIC22.9■■□□□ 1.26
VPS8Q8N3P4 MIR3188-201ENST00000583494 85 ntBASIC22.9■■□□□ 1.26
VPS8Q8N3P4 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 AL022334.2-201ENST00000610000 484 ntBASIC22.9■■□□□ 1.26
VPS8Q8N3P4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 NAP1L6-202ENST00000641404 1222 ntBASIC22.9■■□□□ 1.26
VPS8Q8N3P4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
VPS8Q8N3P4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC22.89■■□□□ 1.26
VPS8Q8N3P4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
VPS8Q8N3P4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
VPS8Q8N3P4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
VPS8Q8N3P4 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
VPS8Q8N3P4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC22.89■■□□□ 1.26
VPS8Q8N3P4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
VPS8Q8N3P4 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
VPS8Q8N3P4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC22.89■■□□□ 1.25
VPS8Q8N3P4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
VPS8Q8N3P4 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
VPS8Q8N3P4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC22.89■■□□□ 1.25
VPS8Q8N3P4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
VPS8Q8N3P4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
VPS8Q8N3P4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC22.89■■□□□ 1.25
VPS8Q8N3P4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
VPS8Q8N3P4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
VPS8Q8N3P4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
VPS8Q8N3P4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
VPS8Q8N3P4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC22.89■■□□□ 1.25
VPS8Q8N3P4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC22.89■■□□□ 1.25
VPS8Q8N3P4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
VPS8Q8N3P4 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
VPS8Q8N3P4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
VPS8Q8N3P4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC22.89■■□□□ 1.25
VPS8Q8N3P4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
VPS8Q8N3P4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
VPS8Q8N3P4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 AC097359.2-201ENST00000604992 2389 ntBASIC22.88■■□□□ 1.25
VPS8Q8N3P4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
VPS8Q8N3P4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 AP002353.1-201ENST00000528257 1599 ntBASIC22.87■■□□□ 1.25
VPS8Q8N3P4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 SLC25A24P2-201ENST00000415059 510 ntBASIC22.87■■□□□ 1.25
VPS8Q8N3P4 AC007274.2-201ENST00000421675 662 ntBASIC22.87■■□□□ 1.25
VPS8Q8N3P4 TSPY25P-201ENST00000429463 745 ntBASIC22.87■■□□□ 1.25
VPS8Q8N3P4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 AC090857.1-201ENST00000527400 390 ntBASIC22.87■■□□□ 1.25
VPS8Q8N3P4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms