Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SCUBE3Q8IX30 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 AP000593.2-201ENST00000542775 1433 ntBASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 FAM86MP-201ENST00000340703 885 ntBASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 CSF2RBP1-201ENST00000447905 391 ntBASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 COX5BP1-201ENST00000507622 393 ntBASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 COX11-210ENST00000639671 696 ntBASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 AL390755.1-201ENST00000623716 2027 ntBASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 MYO15B-237ENST00000642007 4893 ntBASIC15.71■□□□□ 0.11
SCUBE3Q8IX30 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SCUBE3Q8IX30 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SCUBE3Q8IX30 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.71■□□□□ 0.1
SCUBE3Q8IX30 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SCUBE3Q8IX30 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.71■□□□□ 0.1
SCUBE3Q8IX30 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.7■□□□□ 0.1
SCUBE3Q8IX30 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms