Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 AC079316.1-201ENST00000548397 411 ntBASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 AC106820.3-201ENST00000561653 397 ntBASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 OR10B1P-201ENST00000601666 907 ntBASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 BX088702.1-201ENST00000610784 235 ntBASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 AC133552.6-201ENST00000613406 534 ntBASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 INE2-201ENST00000630399 1874 ntBASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 AHCYP2-201ENST00000430630 1300 ntBASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 AC007191.1-201ENST00000623179 2995 ntBASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.54□□□□□ -0.4
FAM90A1Q86YD7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 AC020910.5-201ENST00000623668 1865 ntBASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 AC140479.7-201ENST00000636301 2332 ntBASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 AL354702.1-201ENST00000442006 1960 ntBASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 RN7SKP230-201ENST00000365642 335 ntBASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 AP003171.2-201ENST00000528208 925 ntBASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 AP005482.1-201ENST00000563722 1273 ntBASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 COX11-210ENST00000639671 696 ntBASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 AC007686.3-201ENST00000619017 3487 ntBASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
FAM90A1Q86YD7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms