Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASC4Q6P4E1 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 MRPS18AP1-201ENST00000414458 589 ntBASIC15.3■□□□□ 0.04
CASC4Q6P4E1 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 AL662799.1-202ENST00000614205 422 ntBASIC15.3■□□□□ 0.04
CASC4Q6P4E1 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 AC027601.5-201ENST00000624065 2482 ntBASIC15.3■□□□□ 0.04
CASC4Q6P4E1 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASC4Q6P4E1 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 INTS4P2-202ENST00000614726 2019 ntBASIC15.29■□□□□ 0.04
CASC4Q6P4E1 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 NUS1P3-201ENST00000423502 862 ntBASIC15.29■□□□□ 0.04
CASC4Q6P4E1 AC134915.1-201ENST00000426461 574 ntBASIC15.29■□□□□ 0.04
CASC4Q6P4E1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 AC005498.2-205ENST00000593218 784 ntBASIC15.29■□□□□ 0.04
CASC4Q6P4E1 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CASC4Q6P4E1 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASC4Q6P4E1 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CASC4Q6P4E1 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.28■□□□□ 0.04
CASC4Q6P4E1 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASC4Q6P4E1 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CASC4Q6P4E1 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASC4Q6P4E1 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASC4Q6P4E1 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASC4Q6P4E1 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASC4Q6P4E1 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CASC4Q6P4E1 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CASC4Q6P4E1 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CASC4Q6P4E1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.28■□□□□ 0.04
CASC4Q6P4E1 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CASC4Q6P4E1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.28■□□□□ 0.04
CASC4Q6P4E1 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms