Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC12.55□□□□□ -0.4
HIST2H2BCQ6DN03 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST2H2BCQ6DN03 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 LINC02199-201ENST00000506655 2702 ntBASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 AC092127.1-201ENST00000567093 3455 ntBASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 EML3-212ENST00000494176 2901 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 EML3-216ENST00000529309 2909 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 PIFO-201ENST00000369737 746 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 AC090820.1-201ENST00000519722 591 ntBASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 AP000920.1-201ENST00000531824 344 ntBASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 KNOP1P1-201ENST00000542108 989 ntBASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 GGNBP1-204ENST00000613113 887 ntBASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 RARS-210ENST00000626454 177 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 TEKT4P2-202ENST00000559466 1312 ntBASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 HLF-202ENST00000430986 1385 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 AC092364.2-201ENST00000596710 2692 ntBASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST2H2BCQ6DN03 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 PEBP1P3-201ENST00000455475 548 ntBASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 DPY19L2P4-201ENST00000479881 442 ntBASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 RPS18P9-201ENST00000482817 460 ntBASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 SEPHS2P1-201ENST00000511618 1162 ntBASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 ANKRD26P1-203ENST00000569528 966 ntBASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 SIGLEC22P-201ENST00000599104 714 ntBASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST2H2BCQ6DN03 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms