Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CDC42BPAQ5VT25 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC21.83■■□□□ 1.08
CDC42BPAQ5VT25 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDC42BPAQ5VT25 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC21.83■■□□□ 1.08
CDC42BPAQ5VT25 BAX-205ENST00000391871 687 ntTSL 5 BASIC21.83■■□□□ 1.08
CDC42BPAQ5VT25 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC21.83■■□□□ 1.08
CDC42BPAQ5VT25 AL135901.1-201ENST00000451812 333 ntBASIC21.83■■□□□ 1.08
CDC42BPAQ5VT25 AC025186.1-201ENST00000478174 870 ntBASIC21.83■■□□□ 1.08
CDC42BPAQ5VT25 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC21.83■■□□□ 1.08
CDC42BPAQ5VT25 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDC42BPAQ5VT25 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CDC42BPAQ5VT25 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC21.82■■□□□ 1.08
CDC42BPAQ5VT25 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42BPAQ5VT25 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42BPAQ5VT25 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CDC42BPAQ5VT25 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42BPAQ5VT25 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42BPAQ5VT25 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42BPAQ5VT25 ACTG1P19-201ENST00000418987 1116 ntBASIC21.82■■□□□ 1.08
CDC42BPAQ5VT25 MYADML-201ENST00000474610 2147 ntBASIC21.82■■□□□ 1.08
CDC42BPAQ5VT25 AC226150.1-201ENST00000544259 466 ntBASIC21.82■■□□□ 1.08
CDC42BPAQ5VT25 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42BPAQ5VT25 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC21.82■■□□□ 1.08
CDC42BPAQ5VT25 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42BPAQ5VT25 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
CDC42BPAQ5VT25 GSN-215ENST00000545652 2428 ntTSL 2 BASIC21.82■■□□□ 1.08
CDC42BPAQ5VT25 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42BPAQ5VT25 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CDC42BPAQ5VT25 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42BPAQ5VT25 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 AC006987.1-201ENST00000413610 527 ntBASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 AREG-202ENST00000502307 956 ntTSL 5 BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 CHCHD2P2-201ENST00000503744 321 ntBASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 RN7SL455P-201ENST00000580629 282 ntBASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 AC022532.1-201ENST00000624563 1728 ntBASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPAQ5VT25 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 RPL35P9-201ENST00000446059 350 ntBASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 AC022447.6-201ENST00000515522 438 ntBASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 BX679664.3-201ENST00000414070 555 ntBASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 AC113935.1-201ENST00000471722 555 ntBASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 HPX-213ENST00000615166 826 ntTSL 5 BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPAQ5VT25 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms