Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 HLA-DMA-202ENST00000395303 1007 ntBASIC14.2□□□□□ -0.14
RIF1Q5UIP0 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 Z82244.2-201ENST00000632196 448 ntBASIC14.2□□□□□ -0.14
RIF1Q5UIP0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RIF1Q5UIP0 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 AL954722.1-201ENST00000431238 259 ntBASIC14.19□□□□□ -0.14
RIF1Q5UIP0 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 ISL1-203ENST00000511384 981 ntTSL 5 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 AL050341.2-201ENST00000567508 1541 ntBASIC14.19□□□□□ -0.14
RIF1Q5UIP0 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 MIR645-201ENST00000385283 94 ntBASIC14.19□□□□□ -0.14
RIF1Q5UIP0 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 TNRC18P3-201ENST00000441896 2691 ntBASIC14.19□□□□□ -0.14
RIF1Q5UIP0 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 AP003040.1-201ENST00000532044 1024 ntBASIC14.19□□□□□ -0.14
RIF1Q5UIP0 AC131206.1-201ENST00000538078 1211 ntBASIC14.19□□□□□ -0.14
RIF1Q5UIP0 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 AC079414.2-201ENST00000567157 1104 ntBASIC14.19□□□□□ -0.14
RIF1Q5UIP0 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
RIF1Q5UIP0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 AC124067.4-201ENST00000519691 2379 ntBASIC14.18□□□□□ -0.14
RIF1Q5UIP0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms