Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 ACE3P-201ENST00000423435 1973 ntBASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.39□□□□□ -0.27
RNFT1Q5M7Z0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 CICP23-201ENST00000605013 2741 ntBASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 AC105917.1-201ENST00000506637 2539 ntBASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 RN7SKP214-201ENST00000364208 315 ntBASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 ELK2AP-201ENST00000392510 1007 ntBASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 AL161670.2-201ENST00000557650 1227 ntBASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 AL133499.1-201ENST00000596207 608 ntBASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 AC079336.7-201ENST00000623428 1078 ntBASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 AC073347.1-201ENST00000421633 2643 ntBASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNFT1Q5M7Z0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.37□□□□□ -0.27
RNFT1Q5M7Z0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
RNFT1Q5M7Z0 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RNFT1Q5M7Z0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RNFT1Q5M7Z0 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RNFT1Q5M7Z0 AL109954.1-202ENST00000564051 2148 ntBASIC13.37□□□□□ -0.27
RNFT1Q5M7Z0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.37□□□□□ -0.27
RNFT1Q5M7Z0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RNFT1Q5M7Z0 ZBED1P1-201ENST00000502364 1930 ntBASIC13.37□□□□□ -0.27
RNFT1Q5M7Z0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.37□□□□□ -0.27
RNFT1Q5M7Z0 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms