Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 AC068587.3-201ENST00000526613 355 ntBASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 AC145423.3-201ENST00000615987 467 ntBASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.72■□□□□ 0.27
HERC4Q5GLZ8 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 AC232323.1-201ENST00000540724 2099 ntBASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 CALR4P-201ENST00000431943 946 ntBASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 YBX1P6-201ENST00000442962 1002 ntBASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 AC010328.2-201ENST00000597698 1111 ntBASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC4Q5GLZ8 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
HERC4Q5GLZ8 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.71■□□□□ 0.26
HERC4Q5GLZ8 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HERC4Q5GLZ8 AC015656.1-201ENST00000624209 3578 ntBASIC16.71■□□□□ 0.26
HERC4Q5GLZ8 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms