Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KHDC1Q4VXA5 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 AL158070.2-201ENST00000623713 1621 ntBASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 RNU1-114P-201ENST00000365297 166 ntBASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 TDH-203ENST00000531764 1110 ntBASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 AP001063.1-201ENST00000568332 529 ntBASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KHDC1Q4VXA5 AL157414.3-201ENST00000624276 1954 ntBASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 AP000845.1-201ENST00000581677 2131 ntBASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 U91328.1-201ENST00000437528 223 ntBASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 AC004066.1-201ENST00000502488 802 ntBASIC15.16■□□□□ 0.02
KHDC1Q4VXA5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms