Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 MIR1202-201ENST00000408529 83 ntBASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 MIR4683-201ENST00000579659 81 ntBASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 BX088702.1-201ENST00000610784 235 ntBASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 AP001002.3-201ENST00000623482 206 ntBASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 AC063926.2-201ENST00000623766 1308 ntBASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTPN20Q4JDL3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 AC234783.1-201ENST00000441761 496 ntBASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 CTBP2P5-201ENST00000454986 1264 ntBASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 COX5BP1-201ENST00000507622 393 ntBASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 ALG3P1-201ENST00000508806 1114 ntBASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 RAB43P1-201ENST00000561790 589 ntBASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 C2orf69P2-201ENST00000562032 1123 ntBASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 RN7SL713P-201ENST00000582127 302 ntBASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PTPN20Q4JDL3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PTPN20Q4JDL3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms