Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 EIF3FP3-201ENST00000434851 1086 ntBASIC14.43□□□□□ -0.1
HMGCS1Q01581 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 AC114812.1-204ENST00000449669 728 ntBASIC14.43□□□□□ -0.1
HMGCS1Q01581 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 AC005252.2-201ENST00000624630 1141 ntBASIC14.43□□□□□ -0.1
HMGCS1Q01581 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 AC136759.1-202ENST00000530858 2194 ntBASIC14.43□□□□□ -0.1
HMGCS1Q01581 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGCS1Q01581 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HMGCS1Q01581 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGCS1Q01581 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.42□□□□□ -0.1
HMGCS1Q01581 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGCS1Q01581 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HMGCS1Q01581 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HMGCS1Q01581 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.42□□□□□ -0.1
HMGCS1Q01581 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGCS1Q01581 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
HMGCS1Q01581 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.42□□□□□ -0.1
HMGCS1Q01581 MYCLP2-201ENST00000449268 967 ntBASIC14.42□□□□□ -0.1
HMGCS1Q01581 TERF1P3-201ENST00000505638 1227 ntBASIC14.42□□□□□ -0.1
HMGCS1Q01581 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.42□□□□□ -0.1
HMGCS1Q01581 MIR3197-201ENST00000582241 73 ntBASIC14.42□□□□□ -0.1
HMGCS1Q01581 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.42□□□□□ -0.1
HMGCS1Q01581 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 AC133539.2-201ENST00000604757 467 ntBASIC14.42□□□□□ -0.1
HMGCS1Q01581 AC004233.3-201ENST00000607794 1269 ntBASIC14.42□□□□□ -0.1
HMGCS1Q01581 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.42□□□□□ -0.1
HMGCS1Q01581 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HMGCS1Q01581 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGCS1Q01581 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGCS1Q01581 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HMGCS1Q01581 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 CICP4-201ENST00000447359 2812 ntBASIC14.42□□□□□ -0.1
HMGCS1Q01581 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCS1Q01581 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCS1Q01581 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCS1Q01581 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGCS1Q01581 LRRC59-203ENST00000576448 1531 ntBASIC14.41□□□□□ -0.1
HMGCS1Q01581 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HMGCS1Q01581 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HMGCS1Q01581 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HMGCS1Q01581 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCS1Q01581 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
HMGCS1Q01581 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms