Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.35□□□□□ -0.43
SRPXP78539 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SRPXP78539 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.35□□□□□ -0.43
SRPXP78539 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.35□□□□□ -0.43
SRPXP78539 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRPXP78539 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.35□□□□□ -0.43
SRPXP78539 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SRPXP78539 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.35□□□□□ -0.43
SRPXP78539 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.35□□□□□ -0.43
SRPXP78539 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SRPXP78539 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SRPXP78539 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.35□□□□□ -0.43
SRPXP78539 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRPXP78539 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.35□□□□□ -0.43
SRPXP78539 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SRPXP78539 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SRPXP78539 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRPXP78539 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRPXP78539 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.35□□□□□ -0.43
SRPXP78539 AC011840.2-201ENST00000563063 1520 ntBASIC12.35□□□□□ -0.43
SRPXP78539 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SRPXP78539 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRPXP78539 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRPXP78539 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SRPXP78539 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.35□□□□□ -0.43
SRPXP78539 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
SRPXP78539 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SRPXP78539 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRPXP78539 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRPXP78539 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.35□□□□□ -0.43
SRPXP78539 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRPXP78539 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.35□□□□□ -0.43
SRPXP78539 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SRPXP78539 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRPXP78539 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRPXP78539 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRPXP78539 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRPXP78539 CETN4P-206ENST00000642099 2168 ntBASIC12.35□□□□□ -0.43
SRPXP78539 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SRPXP78539 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.34□□□□□ -0.43
SRPXP78539 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SRPXP78539 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SRPXP78539 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.34□□□□□ -0.43
SRPXP78539 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.34□□□□□ -0.43
SRPXP78539 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.34□□□□□ -0.43
SRPXP78539 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.34□□□□□ -0.43
SRPXP78539 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.34□□□□□ -0.43
SRPXP78539 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 AC073548.1-201ENST00000624088 1882 ntBASIC12.34□□□□□ -0.43
SRPXP78539 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SRPXP78539 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.34□□□□□ -0.43
SRPXP78539 MKNK2P1-201ENST00000437526 628 ntBASIC12.34□□□□□ -0.43
SRPXP78539 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.34□□□□□ -0.43
SRPXP78539 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.34□□□□□ -0.43
SRPXP78539 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.34□□□□□ -0.43
SRPXP78539 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.34□□□□□ -0.43
SRPXP78539 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.34□□□□□ -0.43
SRPXP78539 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
SRPXP78539 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SRPXP78539 CSPG4P11-201ENST00000560634 4910 ntBASIC12.34□□□□□ -0.43
SRPXP78539 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.34□□□□□ -0.43
SRPXP78539 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SRPXP78539 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.34□□□□□ -0.43
SRPXP78539 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.34□□□□□ -0.43
SRPXP78539 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.34□□□□□ -0.43
SRPXP78539 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SRPXP78539 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
SRPXP78539 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SRPXP78539 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
SRPXP78539 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SRPXP78539 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
SRPXP78539 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
SRPXP78539 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SRPXP78539 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.33□□□□□ -0.43
SRPXP78539 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms