Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.25□□□□□ -0.29
NKX6-1P78426 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX6-1P78426 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
NKX6-1P78426 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.25□□□□□ -0.29
NKX6-1P78426 BX539320.1-201ENST00000623759 877 ntBASIC13.25□□□□□ -0.29
NKX6-1P78426 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
NKX6-1P78426 AC013268.4-201ENST00000637413 2228 ntBASIC13.25□□□□□ -0.29
NKX6-1P78426 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX6-1P78426 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
NKX6-1P78426 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NKX6-1P78426 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NKX6-1P78426 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX6-1P78426 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX6-1P78426 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NKX6-1P78426 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX6-1P78426 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NKX6-1P78426 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
NKX6-1P78426 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NKX6-1P78426 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.24□□□□□ -0.29
NKX6-1P78426 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.24□□□□□ -0.29
NKX6-1P78426 AL137784.3-201ENST00000623858 2288 ntBASIC13.24□□□□□ -0.29
NKX6-1P78426 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
NKX6-1P78426 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.24□□□□□ -0.29
NKX6-1P78426 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NKX6-1P78426 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.24□□□□□ -0.29
NKX6-1P78426 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.24□□□□□ -0.29
NKX6-1P78426 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.24□□□□□ -0.29
NKX6-1P78426 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
NKX6-1P78426 CNN2P8-201ENST00000421872 913 ntBASIC13.24□□□□□ -0.29
NKX6-1P78426 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.24□□□□□ -0.29
NKX6-1P78426 AC004066.1-201ENST00000502488 802 ntBASIC13.24□□□□□ -0.29
NKX6-1P78426 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.24□□□□□ -0.29
NKX6-1P78426 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.24□□□□□ -0.29
NKX6-1P78426 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.24□□□□□ -0.29
NKX6-1P78426 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.24□□□□□ -0.29
NKX6-1P78426 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.24□□□□□ -0.29
NKX6-1P78426 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.24□□□□□ -0.29
NKX6-1P78426 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
NKX6-1P78426 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.24□□□□□ -0.29
NKX6-1P78426 AP005019.2-201ENST00000615104 511 ntBASIC13.24□□□□□ -0.29
NKX6-1P78426 PRSS30P-206ENST00000641773 873 ntBASIC13.24□□□□□ -0.29
NKX6-1P78426 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.24□□□□□ -0.29
NKX6-1P78426 AC023908.3-201ENST00000564211 3047 ntBASIC13.24□□□□□ -0.29
NKX6-1P78426 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NKX6-1P78426 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.24□□□□□ -0.29
NKX6-1P78426 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.24□□□□□ -0.29
NKX6-1P78426 AC005089.1-201ENST00000619486 2241 ntBASIC13.24□□□□□ -0.29
NKX6-1P78426 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.24□□□□□ -0.29
NKX6-1P78426 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
NKX6-1P78426 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
NKX6-1P78426 AC007787.1-201ENST00000588095 1583 ntBASIC13.24□□□□□ -0.29
NKX6-1P78426 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.24□□□□□ -0.29
NKX6-1P78426 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-1P78426 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NKX6-1P78426 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX6-1P78426 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-1P78426 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms